Factsheet for PGSC0003DMT400044544

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g055870.2.1	Tomato	cytosol	94.53	82.79
KRH73700	Soybean	cytosol	69.65	61.67
KRH14455	Soybean	cytosol, mitochondrion	68.41	60.71
PGSC0003DMT400073140	Potato	cytosol	65.17	56.83
PGSC0003DMT400035023	Potato	cytosol	65.17	56.71
PGSC0003DMT400026617	Potato	cytosol	29.6	42.5
PGSC0003DMT400052486	Potato	nucleus, plastid	43.78	37.53
PGSC0003DMT400064944	Potato	mitochondrion, plastid	44.03	37.5
PGSC0003DMT400072865	Potato	cytosol	40.3	37.24
PGSC0003DMT400078613	Potato	cytosol	27.61	25.81

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.960	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	UniProt:M1BGC6	PFAM:PF07714	PFAM:PF12796
EnsemblPlantsGene:PGSC0003DMG400017293	PGSC:PGSC0003DMG400017293	EnsemblPlants:PGSC0003DMT400044544	PIRSF:PIRSF000654	PRINTS:PR00109	PFscan:PS50011
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000296992B	SEG:seg	:

Description

Integrin-linked protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400017293]

Coordinates

chr7:+:50966206..50974560

Molecular Weight (calculated)

45550.7 Da

IEP (calculated)

6.911

GRAVY (calculated)

-0.402

Length

402 amino acids

Sequence
(BLAST)

001: MESKSQSRFP LGRQSSLAPE KDGVSDDSVT AGHGVDEGID SGLRLMYMTN DGDLEGMEEL LDSGTSVNYK DIDGRTALHI AACQGYADVV DFLLKNGAHV
101: DAMDRWGSTG TYCVALWRGT EVAVKKLGEE LFTDEDKVKA FGDELALLQK IRHPNVVQFL GAVTQSSPMM IITEYLPKGD LRAFLKRKGA LKPITAVKFA
201: LDIARGINYL HEHKPEAIIH RDLEPENILR DDSGLLKVAD FGLSKLMKFT KTVKEDRPLA RQEDSWRYVA PEVLKHEEYD TKVDVFSFAL ILQEMIEGCP
301: PFSMKQEIEV AKAYVANERP PFRASQKLYA HGLRELIEDC WEEQPSKRPT FQRIIIRLEE INRILLHRRR WKACALNIFQ KLKAILKFDH SNSKSRSSRP
401: TV

Best Arabidopsis Sequence Match ( AT3G58760.1 )
(BLAST)

001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.