Factsheet for AT3G59830.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003392.1-P	Field mustard	plastid	91.4	91.4
CDX67815	Canola	plastid	91.19	91.39
CDX98397	Canola	plastid	90.99	91.18
CDX71872	Canola	cytosol, plastid	89.52	89.14
CDY05975	Canola	nucleus, plastid	89.31	88.94
Bra007480.1-P	Field mustard	nucleus, plastid	89.31	88.94
AT2G43850.1	Thale cress	plastid	85.12	84.76
AT2G31800.1	Thale cress	mitochondrion	73.79	73.95
GSMUA_Achr2P11410_001	Banana	mitochondrion	66.25	65.7
GSMUA_Achr9P02480_001	Banana	cytosol	61.01	65.54
GSMUA_Achr10P...	Banana	plastid	67.09	64.13
GSMUA_Achr8P08560_001	Banana	mitochondrion	62.05	64.07
KXG30604	Sorghum	mitochondrion	62.47	60.94
Os01t0892800-02	Rice	nucleus, plastid	59.33	59.33
TraesCS6D01G201400.1	Wheat	mitochondrion	59.12	58.87
TraesCS6A01G218200.1	Wheat	mitochondrion	59.33	58.59
TraesCS6B01G247800.1	Wheat	mitochondrion	58.91	58.42
HORVU6Hr1G055820.2	Barley	mitochondrion	59.12	58.39
KXG33869	Sorghum	mitochondrion	58.07	57.95
Os02t0608500-01	Rice	plasma membrane	59.54	56.57
TraesCS3A01G400600.1	Wheat	cytosol, plastid	56.81	55.99
TraesCS3D01G395000.1	Wheat	cytosol, plastid	56.81	55.99
TraesCS3B01G433600.1	Wheat	cytosol, plastid	56.6	55.79
Zm00001d017167_P001	Maize	mitochondrion	45.7	53.69
Zm00001d042551_P003	Maize	plastid	57.02	52.92
HORVU3Hr1G090030.12	Barley	cytosol, plastid	56.18	52.24
AT4G18950.1	Thale cress	cytosol	41.72	43.36
AT3G58760.3	Thale cress	golgi, plasma membrane, plastid	42.56	38.02
AT1G14000.1	Thale cress	cytosol	32.91	35.84

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	EntrezGene:825152	ProteinID:AEE79974.1
ArrayExpress:AT3G59830	EnsemblPlantsGene:AT3G59830	RefSeq:AT3G59830	TAIR:AT3G59830	RefSeq:AT3G59830-TAIR-G	EnsemblPlants:AT3G59830.1
TAIR:AT3G59830.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	UniProt:F4J9G8	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004712	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007229	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf
RefSeq:NP_191542.2	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PO:PO:0000005	PO:PO:0001016
PO:PO:0001017	PO:PO:0007616	PO:PO:0009031	PO:PO:0009046	PO:PO:0025022	PO:PO:0025195
PO:PO:0025281	PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF4
InterPro:Prot_kinase_dom	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000034F036

Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:F4J9G8]

Coordinates

chr3:-:22102647..22105441

Molecular Weight (calculated)

54026.0 Da

IEP (calculated)

9.205

GRAVY (calculated)

-0.459

Length

477 amino acids

Sequence
(BLAST)

001: MDNIAAQLKR GISRQFSTGS MRRTLSRQFT RQNSLDPRRN NMRFSFGRQS SLDPIRRSPE SLSCEPHMSV PENLDSTMQL LFMASKGDVN GVEELLNEGI
101: DVNSIDLDGR TALHIASCEG HYDVVKVLLS RRANIDARDR WGSTAAVDAK YYGNVEVYNL LKARGAKAPK TRKTPMTVGN PKEVPEYELN PLELQVRKVD
201: GISKGTYQVA KWNGTRVSVK IFDKDSYSDP ERVNAFTNEL TLLAKARHPN IVQFVGAVTQ NLPMMIVVEC NPKGDLSVYL QKKGRLSPSK ALRFALDIAR
301: GMNYLHECKP DPIIHCELMP KNILLDRGGQ LKISGFGLIK LSKIGEDSAK VVNHEAQIDK SNYYIAPEIY KDEVFDKRAD VHSFGVILYE LTEGVSLFHP
401: KPPEEVAESI CIEGKRPTIR TKSKSYPPEL KELIEECWHP EISVRPIFSE IIIRLDKIVT NCSKQGWWKD TFKFPWK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.