CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014553.1-P	Field mustard	cytosol	99.57	99.57
CDY00588	Canola	mitochondrion	98.29	98.29
CDX71924	Canola	mitochondrion	91.67	92.06
AT3G58760.3	Thale cress	golgi, plasma membrane, plastid	89.32	78.28
CDX99407	Canola	cytosol	58.97	60.13
CDX78907	Canola	cytosol	58.76	59.91
CDX76504	Canola	cytosol	56.41	57.52
CDY15369	Canola	cytosol	29.27	46.6
CDY19106	Canola	mitochondrion	29.06	45.18
CDY19105	Canola	cytosol	16.24	43.68
CDX98397	Canola	plastid	44.02	43.28
CDX67815	Canola	plastid	44.02	43.28
CDX71872	Canola	cytosol, plastid	44.02	43.01
CDY05975	Canola	nucleus, plastid	43.59	42.59
CDX79441	Canola	mitochondrion	43.8	42.18
CDX84758	Canola	mitochondrion	43.8	42.18
CDY36424	Canola	cytosol	38.89	41.94
CDX98142	Canola	cytosol	38.68	41.71
CDY16124	Canola	cytosol	38.68	41.32
CDY33786	Canola	cytosol	38.68	41.32
CDY49253	Canola	cytosol	93.59	40.26
CDY15368	Canola	mitochondrion	14.74	38.12
CDX71868	Canola	extracellular	11.11	13.4
CDX71869	Canola	cytosol	2.35	3.36
CDX71871	Canola	cytosol	2.35	3.12

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078DK23	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDX89004	ProteinID:CDX89004	ProteinID:CDX89004.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00149117001	InterPro:IPR000719	InterPro:IPR002110
InterPro:IPR020683	InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654
PFscan:PS50011	PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0004EF1C70	SEG:seg

Description

BnaA04g01820D

Coordinates

chrLK031857:+:466689..469724

Molecular Weight (calculated)

53125.7 Da

IEP (calculated)

6.802

GRAVY (calculated)

-0.458

Length

468 amino acids

Sequence
(BLAST)

001: MTTIKPKSPA RFKLGRQSSL APDSRTPTDT LTEDEDEEFA AAAAAGIVDP TIRLMYLANE GDIEGISKML DSGTNVDYRD IDGRTALHVA ACQGRTDVVE
101: LLLSRGAKVN SMDRWGSTPL ADAVYYKNHD VIQLLEKHGA KPTIPPMHVL TDREVPEYEI HPSELDFSNS VKISKGTFHK ASWRGIDVAV KTFGEKMFSD
201: EDKMNAFRDE LALLQKIRHP NVVQFLGAVT QSNPMMIVTE YLPKGDLRQY LDRKGSLMPA QAVKFALEIA RGMNYLHEHK PEAIIHCDLE PPNILRDDSG
301: HLKVADFGIS KLLVVKKTDK KDRPITSLDS SWRYMAPEVY RNEEYDTKVD VFSFGLILQE MIEGFVPFHM KEETEVPKAY IEDERPPFNA PAKSYPFGLR
401: ELIQECWDSE ASKRPTFREI ISTLELISDR IARKMSWKVR LGKCLPRIRI FTKRDYVNPS SSRSSITR

Best Arabidopsis Sequence Match ( AT3G58760.1 )
(BLAST)

001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.