CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89004	Canola	mitochondrion	98.29	98.29
CDX71924	Canola	mitochondrion	92.52	92.92
AT3G58760.3	Thale cress	golgi, plasma membrane, plastid	89.96	78.84
CDX99407	Canola	cytosol	59.19	60.35
CDX78907	Canola	cytosol	58.97	60.13
CDX76504	Canola	cytosol	57.05	58.17
CDY15369	Canola	cytosol	29.06	46.26
CDY19106	Canola	mitochondrion	29.06	45.18
CDX98397	Canola	plastid	44.02	43.28
CDX67815	Canola	plastid	44.02	43.28
CDY19105	Canola	cytosol	16.03	43.1
CDX71872	Canola	cytosol, plastid	44.02	43.01
CDY05975	Canola	nucleus, plastid	43.59	42.59
CDY36424	Canola	cytosol	39.1	42.17
CDX79441	Canola	mitochondrion	43.59	41.98
CDX84758	Canola	mitochondrion	43.59	41.98
CDX98142	Canola	cytosol	38.89	41.94
CDY16124	Canola	cytosol	38.89	41.55
CDY33786	Canola	cytosol	38.89	41.55
CDY49253	Canola	cytosol	94.44	40.62
CDY15368	Canola	mitochondrion	14.74	38.12
CDX71868	Canola	extracellular	11.11	13.4
CDX71869	Canola	cytosol	2.35	3.36
CDX71871	Canola	cytosol	2.35	3.12

Protein Annotations

Gene3D:1.10.510.10	Gene3D:1.25.40.20	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078EMJ3	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	EnsemblPlants:CDY00588	ProteinID:CDY00588	ProteinID:CDY00588.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00110350001	InterPro:IPR000719	InterPro:IPR002110	InterPro:IPR020683
InterPro:IPR036770	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFAM:PF12796	PIRSF:PIRSF000654	PFscan:PS50011
PFscan:PS50088	PFscan:PS50297	PANTHER:PTHR44023	PANTHER:PTHR44023:SF7	InterPro:Prot_kinase_dom	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0004EEB943	SEG:seg	:

Description

BnaC04g23370D

Coordinates

chrLK031920:+:486334..489692

Molecular Weight (calculated)

53178.6 Da

IEP (calculated)

6.659

GRAVY (calculated)

-0.460

Length

468 amino acids

Sequence
(BLAST)

001: MKTIKPKSPA RFKLGRQSSL APDSRTPTDT FTEDEDEEFA AAAAAGIVDP TIRLMYLANE GDIEGINKML DSGTNVDYRD IDGRTALHVA ACQGRTDVVE
101: LLLSRGAKVN SMDRWGSTPL ADAVYYKNHD VIQLLEKHGA KPTIPPMHVL TDREVPEYEI HPSELDFSNS VKISKGTFHK ASWRGIDVAV KTFGEEMFSD
201: EDKVNAFRDE LALLQKIRHP NVVQFLGAVT QSNPMMIVTE YLPKGDLRQY LDRKGSLMPA QAVKFALEIA RGMNYLHEHK PEAIIHCDLE PPNILRDDSG
301: HLKVADFGIS KLLVVKKTDK KDRPITSLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGFVPFHL KEETEVPKAY IEDERPPFNA PAKSYPFGLR
401: ELIQECWDSE ASKRPTFREI ISTLELISDR IARKMSWKVR LGKCLPRIRL FTKRDYVNPS SSRSSITR

Best Arabidopsis Sequence Match ( AT3G58760.1 )
(BLAST)

001: MTIKPKSPAR FKLGRQSSLA PESRTPIDTL TEDEDDDLAA AATAGIGDPT IRLMYLANEG DIDGINKMLD SGTNVDYRDI DARTALHVAA CQGRTDVVEL
101: LLSRGAKVDT KDRWGSTPLA DAVYYKNHDV IKLLEKHGAK PTIAPMHVLT DKEVPEYEIH PTELDFSNSV KISKGTFNKA SWRGIDVAVK TFGEEMFTDE
201: DKVNAFRDEL ALLQKIRHPN VVQFLGAVTQ STPMMIVTEY LPKGDLRQYL DRKGPLMPAH AVKFALEIAR GMNYLHEHKP EAIIHCDLEP PNILRDDSGH
301: LKVADFGVSK LLVVKKTVKK DRPVVTCLDS SWRYMAPEVY RNEEYDTKVD VFSFALILQE MIEGCEPFHE IEDREVPKAY IEDERPPFNA PTKSYPFGLQ
401: ELIQDCWDKE ASKRPTFRVI ISTLELISDR IARKRSWKVM LGRCLPRFRL FTKRDYVNPG GSNRSSGSFN R

Arabidopsis Description

Integrin-linked protein kinase family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMD5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.