Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P04700_001 | Banana | cytosol | 87.16 | 87.16 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 86.49 | 85.91 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 85.14 | 85.14 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 79.73 | 79.73 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 79.05 | 79.05 |
| VIT_05s0020g04420.t01 | Wine grape | cytosol | 75.68 | 75.17 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 75.0 | 75.0 |
| Solyc06g053930.2.1 | Tomato | cytosol | 73.65 | 73.15 |
| KRH69070 | Soybean | cytosol | 73.65 | 72.67 |
| KRH34350 | Soybean | cytosol | 73.65 | 72.67 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 72.97 | 72.48 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 72.97 | 72.48 |
| Bra001892.1-P | Field mustard | cytosol | 75.0 | 72.08 |
| CDX92965 | Canola | cytosol | 75.0 | 72.08 |
| KRH31638 | Soybean | cytosol | 72.97 | 72.0 |
| KRG92449 | Soybean | cytosol | 72.97 | 72.0 |
| PGSC0003DMT400042062 | Potato | cytosol | 72.97 | 72.0 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 72.3 | 71.81 |
| CDY34215 | Canola | cytosol | 75.68 | 71.79 |
| Bra023786.1-P | Field mustard | cytosol | 75.68 | 71.79 |
| CDX94883 | Canola | cytosol | 53.38 | 71.17 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 71.62 | 71.14 |
| GSMUA_Achr10P... | Banana | cytosol | 71.62 | 71.14 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 71.62 | 71.14 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 71.62 | 71.14 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 71.62 | 71.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.27 | 70.75 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 70.95 | 70.47 |
| CDY10686 | Canola | cytosol | 73.65 | 70.32 |
| Bra033898.1-P | Field mustard | cytosol | 73.65 | 70.32 |
| AT4G14640.1 | Thale cress | cytosol | 71.62 | 70.2 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 69.59 | 69.59 |
| VIT_14s0030g02150.t01 | Wine grape | cytosol | 71.62 | 69.28 |
| CDY10325 | Canola | cytosol | 52.03 | 68.14 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 53.38 | 68.1 |
| KRH68729 | Soybean | cytosol | 68.24 | 67.79 |
| GSMUA_Achr11P... | Banana | cytosol | 46.62 | 67.65 |
| KRG96966 | Soybean | cytosol | 67.57 | 67.11 |
| KRH67274 | Soybean | cytosol | 66.22 | 66.22 |
| CDY06478 | Canola | cytosol | 66.89 | 65.56 |
| Bra039723.1-P | Field mustard | cytosol | 66.89 | 64.71 |
| AT3G22930.1 | Thale cress | cytosol | 73.65 | 63.01 |
| PGSC0003DMT400034833 | Potato | cytosol | 64.86 | 62.75 |
| CDY40824 | Canola | cytosol | 75.68 | 62.22 |
| KRG95596 | Soybean | cytosol | 62.16 | 62.16 |
| Solyc03g005240.1.1 | Tomato | cytosol | 64.19 | 62.09 |
| VIT_00s0179g00280.t01 | Wine grape | cytosol | 62.16 | 61.74 |
| KRG92667 | Soybean | cytosol | 60.81 | 60.4 |
| KRH34082 | Soybean | cytosol | 60.81 | 60.4 |
| KRG94637 | Soybean | cytosol | 45.27 | 58.77 |
| Solyc01g105630.2.1 | Tomato | cytosol | 58.11 | 58.5 |
| PGSC0003DMT400083727 | Potato | cytosol | 57.43 | 57.82 |
| KRH32074 | Soybean | cytosol | 52.03 | 51.68 |
| KRH71363 | Soybean | cytosol | 52.03 | 51.68 |
| GSMUA_Achr10P... | Banana | cytosol | 62.16 | 48.94 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 60.14 | 48.63 |
| GSMUA_Achr10P... | Banana | cytosol | 61.49 | 48.15 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 68.24 | 44.69 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 41.22 | 37.2 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 40.54 | 36.81 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 39.86 | 36.2 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 39.19 | 35.58 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 35.14 | 35.14 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 35.81 | 21.63 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P09010_001 | EnsemblPlants:GSMUA_Achr5T09010_001 | EnsemblPlantsGene:GSMUA_Achr5G09010_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF336 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000296D597 | UniProt:M0SWY0 | MapMan:35.1 | : | : | : |
Description
Calmodulin [Source:GMGC_GENE;Acc:GSMUA_Achr5G09010_001]
Coordinates
chr5:-:6561463..6562498
Molecular Weight (calculated)
16727.7 Da
IEP (calculated)
3.860
GRAVY (calculated)
-0.416
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCLPAEQIS EFQEAFCLFD KDGDGCITLQ ELATVIRSLG QDPSEDELKC MIKEVDINGN GTIEFAEFLN LMARKIKETD TEEELREAFK VFDKDQNGFI
101: SAGELRNVMM NLGEKMTDEE VLQMIKEADT DGDGQVNFEE FSRMMTAA
101: SAGELRNVMM NLGEKMTDEE VLQMIKEADT DGDGQVNFEE FSRMMTAA
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIKEAD VDGDGQINYE EFVKVMMAK
Arabidopsis Description
CAM5Calmodulin 5 [Source:UniProtKB/TrEMBL;Acc:F4IVN6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.