Factsheet for GSMUA_Achr4P26370_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P04700_001
GSMUA_Achr1P14070_001
GSMUA_Achr1P27230_001
GSMUA_Achr2P01120_001
GSMUA_Achr2P12680_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr3P25390_001
GSMUA_Achr4P22570_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P09010_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr6P24410_001
GSMUA_Achr7P01390_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17080.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592
AT4G17080.1	GSMUA_Achr1P04700_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr1P14070_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr1P27230_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr2P12680_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr3P25390_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr4P22570_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr5P09010_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr6P24410_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr7P01390_001	AT4G14640.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr10P...	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr11P...	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr2P01120_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr3P09330_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr3P25040_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr5P07820_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr5P27590_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr6P15990_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr6P23670_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr8P05790_001	AT5G21274.1	17360592
AT4G17080.1	GSMUA_Achr9P17280_001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54848	Soybean	endoplasmic reticulum	24.83	72.79
Bra040112.1-P	Field mustard	cytosol	39.44	72.65
KRH66442	Soybean	cytosol	22.27	72.18
KRH48871	Soybean	cytosol	22.04	71.43
HORVU4Hr1G082070.1	Barley	endoplasmic reticulum	56.84	63.97
GSMUA_Achr2P10390_001	Banana	cytosol	61.95	55.86
EER94469	Sorghum	plastid	58.93	55.82
Zm00001d029979_P001	Maize	plastid	58.47	55.51
Zm00001d000053_P001	Maize	cytosol, plastid	58.47	55.51
Os10t0565000-01	Rice	cytosol, plastid	60.09	55.46
TraesCSU01G007200.1	Wheat	nucleus	58.47	54.19
HORVU1Hr1G055220.1	Barley	cytosol	58.47	53.73
KRH46546	Soybean	cytosol	54.99	52.43
KRH75587	Soybean	cytosol	54.99	52.32
GSMUA_Achr4P21670_001	Banana	cytosol	59.16	51.52
PGSC0003DMT400034161	Potato	cytosol	57.54	51.45
VIT_15s0021g01010.t01	Wine grape	cytosol	58.0	50.61
Solyc10g061960.1.1	Tomato	cytosol	57.08	50.31
PGSC0003DMT400004624	Potato	plastid	50.35	50.12
KRH04250	Soybean	cytosol	50.35	50.12
GSMUA_Achr8P23250_001	Banana	mitochondrion	40.84	49.44
GSMUA_Achr5P17600_001	Banana	endoplasmic reticulum, plasma membrane	38.98	48.84
GSMUA_Achr3P07060_001	Banana	mitochondrion	38.98	48.14
CDX76579	Canola	cytosol, endoplasmic reticulum, golgi	48.96	47.31
GSMUA_Achr1P21340_001	Banana	endoplasmic reticulum, golgi	38.28	47.01
Bra021069.1-P	Field mustard	cytosol, golgi, plasma membrane	48.96	46.99
VIT_02s0012g00090.t01	Wine grape	mitochondrion	57.77	43.99
Solyc08g077730.2.1	Tomato	cytosol	51.97	42.83
CDY35600	Canola	cytosol	49.19	42.74
CDY43465	Canola	cytosol	48.96	42.71
CDY67767	Canola	cytosol	49.42	42.35
AT2G35170.1	Thale cress	cytosol	46.4	41.32
AT4G17080.1	Thale cress	cytosol, peroxisome, plasma membrane	48.72	40.94
GSMUA_Achr7P18850_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	42.69	26.03
GSMUA_AchrUn_...	Banana	cytosol	19.26	11.01
GSMUA_Achr6P09940_001	Banana	cytosol	17.4	10.74
GSMUA_Achr2P14650_001	Banana	cytosol	17.4	10.62
GSMUA_Achr11P...	Banana	cytosol	18.1	10.51
GSMUA_Achr10P...	Banana	cytosol	19.03	10.37
GSMUA_Achr2P22450_001	Banana	cytosol	17.17	10.14
GSMUA_Achr5P16140_001	Banana	cytosol	17.17	9.99
GSMUA_Achr7P04480_001	Banana	cytosol	10.21	9.76
GSMUA_Achr3P01800_001	Banana	cytosol	15.08	9.63
GSMUA_Achr2P06790_001	Banana	cytosol	15.55	9.32
GSMUA_Achr6P06260_001	Banana	cytosol	15.08	9.02
GSMUA_Achr11P...	Banana	cytosol	17.4	8.95
GSMUA_Achr3P17530_001	Banana	cytosol	14.85	8.85
GSMUA_Achr3P21120_001	Banana	cytosol	15.55	8.65
GSMUA_Achr4P24300_001	Banana	cytosol	13.46	8.22
GSMUA_Achr1P13100_001	Banana	cytosol	9.28	5.73
GSMUA_Achr2P15390_001	Banana	nucleus	3.25	3.71

Protein Annotations

EnsemblPlants:GSMUA_Achr4P26370_001	EnsemblPlants:GSMUA_Achr4T26370_001	EnsemblPlantsGene:GSMUA_Achr4G26370_001	Gene3D:2.20.110.10	InterPro:MORN	PANTHER:PTHR23084
PANTHER:PTHR23084:SF203	PFAM:PF02493	SEG:seg	SMART:SM00698	SUPFAM:SSF82185	UniParc:UPI000294F565
UniProt:M0SS99	MapMan:35.1	:	:	:	:

Description

Putative Phosphatidylinositol-4-phosphate 5-kinase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G26370_001]

Coordinates

chr4:+:25714309..25719362

Molecular Weight (calculated)

47255.2 Da

IEP (calculated)

9.491

GRAVY (calculated)

-0.523

Length

431 amino acids

Sequence
(BLAST)

001: MQSSSLVLFG PPHPPPLPSP SPAWLPGASS PRPPAAFSVI STSASASSSS SPFPPSTSSS PPPALTAPAS PILWSIGSSS SDKPKTDHRP VSGFNAQLYS
101: NGDVYEGEFH QGKCSGSGVY CYYMSGRYEG DWVDGKYDGY GVETWARGSR YRGHYRQGLR HGFGVYRFYT GDMYAGEWSN GQSHGCGLHT CEDGSRYAGE
201: FKSGVKHGLG HYHFRNGDTY AGEYFADKMH GFGVYRFANG HQYEGAWHEG RRQGLGMYTF RNGETQSGHW QNGILETLST QSINLGSSIA VNHSKVLNAV
301: QEARRASEKA YDVPRVDDRV NKAVASANKA ANAARVAAVK AVQMRIPNNG NHTLPPVVED SRQRRSMHRD VCLHVQARRH AHSAILREWA FSRALCWHVK
401: MLMVCRSVLE LPWLPFSSAS LLGLRAIINP T

Best Arabidopsis Sequence Match ( AT4G17080.1 )
(BLAST)

001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL

Arabidopsis Description

AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.