Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400034161 | Potato | cytosol | 95.71 | 97.1 |
| KRH66442 | Soybean | cytosol | 21.68 | 79.7 |
| KRH48871 | Soybean | cytosol | 21.27 | 78.2 |
| KRH54848 | Soybean | endoplasmic reticulum | 22.49 | 74.83 |
| VIT_15s0021g01010.t01 | Wine grape | cytosol | 70.35 | 69.64 |
| KRH46546 | Soybean | cytosol | 61.55 | 66.59 |
| HORVU4Hr1G082070.1 | Barley | endoplasmic reticulum | 52.15 | 66.58 |
| KRH75587 | Soybean | cytosol | 61.35 | 66.23 |
| GSMUA_Achr2P10390_001 | Banana | cytosol | 59.92 | 61.3 |
| Zm00001d000053_P001 | Maize | cytosol, plastid | 56.24 | 60.57 |
| EER94469 | Sorghum | plastid | 56.24 | 60.44 |
| Zm00001d029979_P001 | Maize | plastid | 55.83 | 60.13 |
| GSMUA_Achr4P21670_001 | Banana | cytosol | 59.71 | 58.99 |
| Os10t0565000-01 | Rice | cytosol, plastid | 56.24 | 58.89 |
| TraesCSU01G007200.1 | Wheat | nucleus | 54.6 | 57.42 |
| HORVU1Hr1G055220.1 | Barley | cytosol | 55.01 | 57.36 |
| GSMUA_Achr4P26370_001 | Banana | plastid | 50.31 | 57.08 |
| Solyc08g077730.2.1 | Tomato | cytosol | 56.24 | 52.58 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 40.9 | 46.73 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 39.47 | 45.84 |
| Solyc04g015470.2.1 | Tomato | cytosol, vacuole | 17.18 | 11.21 |
| Solyc01g096410.2.1 | Tomato | cytosol | 17.38 | 10.91 |
| Solyc10g078460.1.1 | Tomato | mitochondrion | 16.56 | 10.62 |
| Solyc10g086320.1.1 | Tomato | cytosol | 16.56 | 10.27 |
| Solyc12g019880.1.1 | Tomato | cytosol | 15.75 | 10.21 |
| Solyc01g104140.2.1 | Tomato | cytosol | 16.16 | 10.21 |
| Solyc11g013180.1.1 | Tomato | cytosol | 16.56 | 9.9 |
| Solyc09g008480.2.1 | Tomato | cytosol | 15.75 | 9.47 |
| Solyc12g013470.1.1 | Tomato | cytosol | 5.73 | 8.62 |
| Solyc10g080750.1.1 | Tomato | cytosol | 3.89 | 4.46 |
| Solyc04g017620.2.1 | Tomato | cytosol | 1.23 | 2.9 |
| Solyc09g055130.1.1 | Tomato | cytosol | 0.2 | 1.72 |
Protein Annotations
| EnsemblPlants:Solyc10g061960.1.1 | EnsemblPlantsGene:Solyc10g061960.1 | Gene3D:2.20.110.10 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:MORN | PANTHER:PTHR23084 | PANTHER:PTHR23084:SF203 | PFAM:PF02493 | SEG:seg | SMART:SM00698 |
| SUPFAM:SSF82185 | TMHMM:TMhelix | UniParc:UPI0002769757 | UniProt:K4D1I6 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr10:+:23925561..23930260
Molecular Weight (calculated)
55096.7 Da
IEP (calculated)
9.786
GRAVY (calculated)
-0.519
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQKKSEVQI GKESSCISSD FNPTPPLVSS SSLSVHQKQH TSISPTPPQH TAIQIYVENN DNDPIQPHTP TKTTPHKRPH LGSKSVFKSP PSSPLHKYPF
101: SSLKPQNPYT NFHIYPCLCH LCRIFRLHIR LILLLSLPFF YFFVSHPTNS FFLDFLSAFA FSSALLFSLN LALPRLPSIR LFLSRSLPIK LSSSKQVSNN
201: ALPVFWSIGS RAKIDKTVNS GCYVQAYSNG DVYEGEFHKG KSSGSGVYYY YLSGRFEGDW VDGKYDGYGV ETWARGSRYR GQYRQGLRHG FGVYRFFTGD
301: VYAGEWSNGQ SHGCGVHTCE DGSRYVGEFK WGVKHGLGHY HFRNGDNYAG EYFADKMHGF GVYVFANGHR YEGAWHEGRR QGLGMYTFRN GETQSGHWQN
401: GVLDIPSTQN NSYHVSPVAV YHSKVLNAVQ EARRAAERAY DVAKVDERVN RAVSAANKAA NAARVAAVKA VQKQMHHHRR NSDDLAMFN
101: SSLKPQNPYT NFHIYPCLCH LCRIFRLHIR LILLLSLPFF YFFVSHPTNS FFLDFLSAFA FSSALLFSLN LALPRLPSIR LFLSRSLPIK LSSSKQVSNN
201: ALPVFWSIGS RAKIDKTVNS GCYVQAYSNG DVYEGEFHKG KSSGSGVYYY YLSGRFEGDW VDGKYDGYGV ETWARGSRYR GQYRQGLRHG FGVYRFFTGD
301: VYAGEWSNGQ SHGCGVHTCE DGSRYVGEFK WGVKHGLGHY HFRNGDNYAG EYFADKMHGF GVYVFANGHR YEGAWHEGRR QGLGMYTFRN GETQSGHWQN
401: GVLDIPSTQN NSYHVSPVAV YHSKVLNAVQ EARRAAERAY DVAKVDERVN RAVSAANKAA NAARVAAVKA VQKQMHHHRR NSDDLAMFN
001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL
Arabidopsis Description
AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.