Factsheet for Zm00001d000053_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d033980_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17080.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT4G17080.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT4G17080.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT4G17080.1	Zm00001d005003_P002	AT2G41100.1	17360592
AT4G17080.1	Zm00001d008278_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d010649_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d028948_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d038543_P004	AT2G41100.1	17360592
AT4G17080.1	Zm00001d038545_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d041430_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d043144_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d047597_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d052415_P001	AT2G41100.1	17360592
AT4G17080.1	Zm00001d033980_P001	AT4G14640.1	17360592
AT4G17080.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT4G17080.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT4G17080.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT4G17080.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94469	Sorghum	plastid	97.36	97.14
Zm00001d029979_P001	Maize	plastid	95.59	95.59
Os10t0565000-01	Rice	cytosol, plastid	89.21	86.72
HORVU4Hr1G082070.1	Barley	endoplasmic reticulum	73.13	86.68
HORVU1Hr1G055220.1	Barley	cytosol	87.44	84.65
TraesCSU01G007200.1	Wheat	nucleus	84.36	82.37
Bra040112.1-P	Field mustard	cytosol	38.99	75.64
KRH66442	Soybean	cytosol	21.37	72.93
KRH54848	Soybean	endoplasmic reticulum	23.57	72.79
KRH48871	Soybean	cytosol	20.7	70.68
GSMUA_Achr2P10390_001	Banana	cytosol	68.72	65.27
KRH46546	Soybean	cytosol	58.81	59.07
KRH75587	Soybean	cytosol	58.81	58.94
GSMUA_Achr4P21670_001	Banana	cytosol	63.88	58.59
GSMUA_Achr4P26370_001	Banana	plastid	55.51	58.47
PGSC0003DMT400034161	Potato	cytosol	61.23	57.68
KRH04250	Soybean	cytosol	53.96	56.58
VIT_15s0021g01010.t01	Wine grape	cytosol	61.23	56.28
Solyc10g061960.1.1	Tomato	cytosol	60.57	56.24
CDX76579	Canola	cytosol, endoplasmic reticulum, golgi	51.98	52.91
Bra021069.1-P	Field mustard	cytosol, golgi, plasma membrane	52.2	52.78
PGSC0003DMT400004624	Potato	plastid	50.22	52.66
CDY35600	Canola	cytosol	53.52	48.99
VIT_02s0012g00090.t01	Wine grape	mitochondrion	60.79	48.76
CDY67767	Canola	cytosol	53.3	48.11
CDY43465	Canola	cytosol	52.2	47.98
Solyc08g077730.2.1	Tomato	cytosol	54.19	47.04
AT4G17080.1	Thale cress	cytosol, peroxisome, plasma membrane	52.64	46.59
Zm00001d020697_P001	Maize	cytosol, golgi, plasma membrane, plastid	41.41	46.31
Zm00001d005849_P001	Maize	cytosol, golgi, plasma membrane	40.97	45.81
AT2G35170.1	Thale cress	cytosol	48.46	45.45
Zm00001d031777_P001	Maize	cytosol, golgi, plasma membrane	39.43	44.42
Zm00001d050008_P001	Maize	cytosol, golgi, plasma membrane	40.09	43.75
Zm00001d038430_P001	Maize	cytosol, golgi, plasma membrane	24.01	38.11
Zm00001d029209_P003	Maize	cytosol	18.5	11.38
Zm00001d007082_P001	Maize	cytosol	18.28	10.72
Zm00001d013469_P002	Maize	cytosol	16.74	10.48
Zm00001d022391_P001	Maize	cytosol	18.28	10.48
Zm00001d033670_P001	Maize	cytosol	16.08	10.47
Zm00001d013920_P002	Maize	nucleus	18.28	10.09
Zm00001d032539_P001	Maize	nucleus	18.28	10.09
Zm00001d014911_P009	Maize	cytosol	17.62	9.88
Zm00001d045910_P001	Maize	cytosol	3.3	9.87
Zm00001d033645_P001	Maize	cytosol	16.08	9.51
Zm00001d004955_P001	Maize	mitochondrion, plastid	17.4	8.96
Zm00001d029211_P003	Maize	mitochondrion	6.39	6.95
Zm00001d047457_P002	Maize	cytosol	4.85	5.79
Zm00001d028512_P001	Maize	cytosol	6.83	5.72

Protein Annotations

EnsemblPlants:Zm00001d000053_P001	EnsemblPlants:Zm00001d000053_T001	EnsemblPlantsGene:Zm00001d000053	Gene3D:2.20.110.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:MORN	PANTHER:PTHR23084	PANTHER:PTHR23084:SF203	PFAM:PF02493	SEG:seg
SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix	UniParc:UPI000220DB81	UniProt:A0A1X7YEB1	MapMan:35.1

Description

Histone H3 K4-specific methyltransferase SET7/9 family protein

Coordinates

chrB73V4_ctg182:+:1230822..1235148

Molecular Weight (calculated)

49800.9 Da

IEP (calculated)

9.981

GRAVY (calculated)

-0.394

Length

454 amino acids

Sequence
(BLAST)

001: MHHHHHHPAA VLESAAPAAD PPPPPVLDPS SLRIHIPSSP HHALPSTPHK RPVVMTSSSS SSTPTRPSPS PFTPPRRRKV PAPAAPAGGA AARYLLRCLH
101: LRLRILLLIS LPSLYFLSPT PAILPHSLLA DFLSAAAFSC ALLLLLCLSL PRLPFALPLP LPLRRARRSP ILWSIGSSPS ASATTPTTGH FVQVYSNGDV
201: YEGQFHRGRC TGSGVYYYYM SGRYEGDWVD GKYDGFGVET WARGSRYRGQ YRHGLRHGYG VYRFYTGDVY AGEWSNGQSH GYGVHTCEDG SRYVGEFKRG
301: VKHGLGHYHF RNGDTYAGEY FADRMHGFGI YSFANGHRYE GAWHEGRRQG LGMYSFRNGE TQAGHWQNGV LDTLCTQNFI PGSPIAVNHS KVLNAVQEAR
401: RAAEKAYDIP RVDDRVNRAV AAANKAANAA RVAAVKAAQK RNPNNGDDLP LSVV

Best Arabidopsis Sequence Match ( AT4G17080.1 )
(BLAST)

001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL

Arabidopsis Description

AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.