Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH57539 | Soybean | cytosol | 52.42 | 83.46 |
| KRH54848 | Soybean | endoplasmic reticulum | 23.09 | 68.03 |
| Bra040112.1-P | Field mustard | cytosol | 36.49 | 67.52 |
| KRH66442 | Soybean | cytosol | 19.86 | 64.66 |
| KRH48871 | Soybean | cytosol | 19.4 | 63.16 |
| HORVU4Hr1G082070.1 | Barley | endoplasmic reticulum | 52.89 | 59.79 |
| KRH46546 | Soybean | cytosol | 59.12 | 56.64 |
| KRH75587 | Soybean | cytosol | 57.74 | 55.19 |
| Zm00001d000053_P001 | Maize | cytosol, plastid | 56.58 | 53.96 |
| EER94469 | Sorghum | plastid | 56.35 | 53.63 |
| PGSC0003DMT400004624 | Potato | plastid | 52.89 | 52.89 |
| Os10t0565000-01 | Rice | cytosol, plastid | 56.81 | 52.68 |
| Zm00001d029979_P001 | Maize | plastid | 55.2 | 52.64 |
| KRH26231 | Soybean | plastid | 20.55 | 52.05 |
| TraesCSU01G007200.1 | Wheat | nucleus | 55.43 | 51.61 |
| HORVU1Hr1G055220.1 | Barley | cytosol | 55.89 | 51.6 |
| CDX76579 | Canola | cytosol, endoplasmic reticulum, golgi | 53.12 | 51.57 |
| GSMUA_Achr2P10390_001 | Banana | cytosol | 56.81 | 51.46 |
| Bra021069.1-P | Field mustard | cytosol, golgi, plasma membrane | 53.12 | 51.22 |
| GSMUA_Achr4P26370_001 | Banana | plastid | 50.12 | 50.35 |
| GSMUA_Achr4P21670_001 | Banana | cytosol | 57.04 | 49.9 |
| VIT_02s0012g00090.t01 | Wine grape | mitochondrion | 61.66 | 47.17 |
| CDY35600 | Canola | cytosol | 53.81 | 46.98 |
| CDY43465 | Canola | cytosol | 53.58 | 46.96 |
| CDY67767 | Canola | cytosol | 54.5 | 46.92 |
| Solyc08g077730.2.1 | Tomato | cytosol | 56.35 | 46.65 |
| AT2G35170.1 | Thale cress | cytosol | 51.5 | 46.07 |
| AT4G17080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.5 | 46.0 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 43.19 | 43.49 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 42.03 | 41.94 |
| KRH16298 | Soybean | plastid | 43.65 | 41.54 |
| KRH64735 | Soybean | cytosol | 18.24 | 11.25 |
| KRH16603 | Soybean | plastid | 17.78 | 10.92 |
| KRH53182 | Soybean | cytosol | 18.01 | 10.88 |
| KRH18809 | Soybean | plastid | 17.78 | 10.88 |
| KRH59671 | Soybean | cytosol | 17.09 | 10.39 |
| KRH63941 | Soybean | cytosol | 16.63 | 10.3 |
| KRH41004 | Soybean | cytosol, plastid | 17.09 | 10.29 |
| KRH43052 | Soybean | cytosol | 18.24 | 10.18 |
| KRH59177 | Soybean | cytosol | 17.78 | 9.96 |
| KRH71714 | Soybean | cytosol | 17.78 | 9.94 |
| KRH53997 | Soybean | cytosol | 16.17 | 9.9 |
| KRH10423 | Soybean | cytosol | 17.55 | 9.86 |
| KRH44044 | Soybean | cytosol | 17.32 | 9.75 |
| KRH13374 | Soybean | cytosol | 16.86 | 9.72 |
| KRH30061 | Soybean | cytosol | 16.86 | 9.66 |
| KRH20721 | Soybean | cytosol | 16.63 | 9.57 |
| KRG95108 | Soybean | cytosol | 16.86 | 9.41 |
| KRH66776 | Soybean | cytosol | 17.09 | 9.4 |
| KRH67772 | Soybean | cytosol | 17.32 | 9.17 |
| KRH19963 | Soybean | cytosol | 17.09 | 9.0 |
| KRH32566 | Soybean | cytosol | 16.63 | 8.74 |
| KRG99568 | Soybean | cytosol | 1.39 | 6.74 |
| KRG94537 | Soybean | endoplasmic reticulum, plastid, vacuole | 2.08 | 5.7 |
| KRH15888 | Soybean | cytosol | 1.39 | 5.61 |
| KRH04913 | Soybean | cytosol | 0.46 | 3.23 |
| KRG96049 | Soybean | cytosol, mitochondrion | 0.69 | 1.63 |
Protein Annotations
| EMBL:ACUP02010393 | EnsemblPlants:KRH04250 | EnsemblPlantsGene:GLYMA_17G149400 | EntrezGene:100785377 | Gene3D:2.20.110.10 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:MORN | PANTHER:PTHR23084 | PANTHER:PTHR23084:SF203 | PFAM:PF02493 |
| ProteinID:KRH04250 | ProteinID:KRH04250.1 | SEG:seg | SMART:SM00698 | SUPFAM:SSF82185 | TMHMM:TMhelix |
| UniParc:UPI000233EC2A | UniProt:I1MV90 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:12389231..12394175
Molecular Weight (calculated)
48650.0 Da
IEP (calculated)
9.358
GRAVY (calculated)
-0.586
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MLMHHHHKPE LHIGKENPHL SSDDAATSTP QTHFSIQVSP SSPHPPPPNS PNTPFHHERF SNKRIIPIMT FPLFQTPFGA KFPTSKLLPR FRFLLFLPLP
101: SLYLLFSNPS PLDFFSVIAF SAALFVSLNL ALSFFTRLFP TKFSSSSSSS SPQPVVWSIG SNPKQVKNTN WGCWVQVYSN GDVYEGEFQK GKCWGSGVYH
201: YHMHGRYEGG WVDGKYDGYG VETWARGSRY RGQYREGLRH GMGIYKFYCG DVYGGEWSNG QCHGFGVHTC IDGSRYVGEF KWGVKHGLGQ YHFRNGDIYA
301: GEYFADKMHG FGVYQFQNGH RYEGAWHEGR RQGLGMYTFR NGETQCGHWQ NGILDDPKRH NSPTGSPCAV DHAKVFNAVQ DAHSAAEKAY NMAKVDDGVN
401: KVVAAANKAA NTARDAAVKA VQNRMHHNNS NNK
101: SLYLLFSNPS PLDFFSVIAF SAALFVSLNL ALSFFTRLFP TKFSSSSSSS SPQPVVWSIG SNPKQVKNTN WGCWVQVYSN GDVYEGEFQK GKCWGSGVYH
201: YHMHGRYEGG WVDGKYDGYG VETWARGSRY RGQYREGLRH GMGIYKFYCG DVYGGEWSNG QCHGFGVHTC IDGSRYVGEF KWGVKHGLGQ YHFRNGDIYA
301: GEYFADKMHG FGVYQFQNGH RYEGAWHEGR RQGLGMYTFR NGETQCGHWQ NGILDDPKRH NSPTGSPCAV DHAKVFNAVQ DAHSAAEKAY NMAKVDDGVN
401: KVVAAANKAA NTARDAAVKA VQNRMHHNNS NNK
001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL
Arabidopsis Description
AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.