CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46546	Soybean	cytosol	93.82	94.03
KRH54848	Soybean	endoplasmic reticulum	28.26	87.07
KRH66442	Soybean	cytosol	24.28	82.71
KRH48871	Soybean	cytosol	23.4	79.7
HORVU4Hr1G082070.1	Barley	endoplasmic reticulum	54.75	64.75
PGSC0003DMT400034161	Potato	cytosol	66.89	62.86
Solyc10g061960.1.1	Tomato	cytosol	66.23	61.35
EER94469	Sorghum	plastid	59.16	58.9
Zm00001d000053_P001	Maize	cytosol, plastid	58.94	58.81
GSMUA_Achr2P10390_001	Banana	cytosol	62.03	58.79
Zm00001d029979_P001	Maize	plastid	58.72	58.59
KRH04250	Soybean	cytosol	55.19	57.74
Os10t0565000-01	Rice	cytosol, plastid	58.94	57.17
GSMUA_Achr4P21670_001	Banana	cytosol	60.93	55.76
TraesCSU01G007200.1	Wheat	nucleus	57.17	55.7
HORVU1Hr1G055220.1	Barley	cytosol	57.17	55.22
GSMUA_Achr4P26370_001	Banana	plastid	52.32	54.99
KRH26231	Soybean	plastid	20.75	54.97
KRH64714	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.16	44.01
KRH53208	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	41.5	43.72
KRH57539	Soybean	cytosol	25.39	42.28
KRH16298	Soybean	plastid	41.06	40.88
KRH64735	Soybean	cytosol	18.98	12.25
KRH53182	Soybean	cytosol	19.21	12.13
KRH18809	Soybean	plastid	18.54	11.86
KRH16603	Soybean	plastid	18.32	11.77
KRH71714	Soybean	cytosol	19.43	11.35
KRH63941	Soybean	cytosol	17.44	11.3
KRH59671	Soybean	cytosol	17.66	11.24
KRH41004	Soybean	cytosol, plastid	17.66	11.13
KRH43052	Soybean	cytosol	18.98	11.08
KRH13374	Soybean	cytosol	18.1	10.92
KRH20721	Soybean	cytosol	18.1	10.9
KRH59177	Soybean	cytosol	18.54	10.87
KRH53997	Soybean	cytosol	16.78	10.75
KRH10423	Soybean	cytosol	18.1	10.64
KRH30061	Soybean	cytosol	17.66	10.58
KRH44044	Soybean	cytosol	17.66	10.4
KRG95108	Soybean	cytosol	17.22	10.05
KRH66776	Soybean	cytosol	17.22	9.91
KRH67772	Soybean	cytosol	17.88	9.9
KRH19963	Soybean	cytosol	17.88	9.85
KRH32566	Soybean	cytosol	17.66	9.71
KRG99568	Soybean	cytosol	1.55	7.87
KRH15888	Soybean	cytosol	1.32	5.61
KRG94537	Soybean	endoplasmic reticulum, plastid, vacuole	1.77	5.06
KRG96049	Soybean	cytosol, mitochondrion	1.99	4.89
KRH04913	Soybean	cytosol	0.66	4.84

Protein Annotations

EMBL:ACUP02000394	EnsemblPlants:KRH75587	EnsemblPlantsGene:GLYMA_01G094800	EntrezGene:100816562	Gene3D:2.20.110.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:MORN	ncoils:Coil	PANTHER:PTHR23084	PANTHER:PTHR23084:SF203
PFAM:PF02493	ProteinID:KRH75587	ProteinID:KRH75587.1	SEG:seg	SMART:SM00698	SUPFAM:SSF82185
TMHMM:TMhelix	UniParc:UPI0002337710	UniProt:K7K2E0	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr1:+:29243723..29260732

Molecular Weight (calculated)

50839.9 Da

IEP (calculated)

10.028

GRAVY (calculated)

-0.479

Length

453 amino acids

Sequence
(BLAST)

001: MHQKKSEVQI GKESVGVSSD FNPQFQKHPY HRHQQFYPQI EIDISPSLPP QQHNTAPQRT TPPSLSKQKH IFKPQNAAFF SVTVAAKSAA FRMLRRVRRQ
101: RALLLLAIPL LYLYFLVSRS FLLDLLSAIA FSAALVFSLN LAFPLPFRSI RLKAAKNSAS RPAAALPVFW TIGSRQKTEK RAAASGCWVQ VFGNGDVYEG
201: EFHRGKCSGS GVYYYSRSGR YEGDWVDGKY DGYGVETWAR GSRYRGCYWQ GLRHGFGVYR FYTGDVYAGE WSNGQSHGCG VHTCEDGSRY VGEFKWGVKH
301: GHGHYHFRNG DTYAGEYFAD KMHGFGIYRF ANCHRYEGAW HEGRRQGLGM YTFRNGETQS GHWQNGVLDI LSTQNTTSPV SPVGVYHSKV LNAVQEARQA
401: AEKAYDMAKV DEGVNRAVAA SNRAANAARV AAVKAVQKQN YHVNSESFSI PVV

Best Arabidopsis Sequence Match ( AT4G17080.1 )
(BLAST)

001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL

Arabidopsis Description

AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.