Factsheet for HORVU4Hr1G082070.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G17080.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT4G17080.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT4G17080.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT4G17080.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT4G17080.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT4G17080.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT4G17080.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT4G17080.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT4G17080.1	HORVU0Hr1G001280.1	AT2G41100.1	17360592
AT4G17080.1	HORVU2Hr1G016740.4	AT2G41100.1	17360592
AT4G17080.1	HORVU3Hr1G038010.1	AT2G41100.1	17360592
AT4G17080.1	HORVU3Hr1G079210.4	AT2G41100.1	17360592
AT4G17080.1	HORVU4Hr1G026290.3	AT2G41100.1	17360592
AT4G17080.1	HORVU5Hr1G014060.1	AT2G41100.1	17360592
AT4G17080.1	HORVU5Hr1G014070.2	AT2G41100.1	17360592
AT4G17080.1	HORVU5Hr1G044710.4	AT2G41100.1	17360592
AT4G17080.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT4G17080.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT4G17080.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT4G17080.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT4G17080.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT4G17080.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT4G17080.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT4G17080.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G007200.1	Wheat	nucleus	94.26	77.63
HORVU1Hr1G055220.1	Barley	cytosol	94.52	77.19
Os10t0565000-01	Rice	cytosol, plastid	91.12	74.73
EER94469	Sorghum	plastid	88.51	74.51
Bra040112.1-P	Field mustard	cytosol	45.17	73.93
KRH66442	Soybean	cytosol	25.59	73.68
Zm00001d029979_P001	Maize	plastid	86.95	73.35
Zm00001d000053_P001	Maize	cytosol, plastid	86.68	73.13
KRH48871	Soybean	cytosol	25.33	72.93
KRH54848	Soybean	endoplasmic reticulum	27.15	70.75
GSMUA_Achr2P10390_001	Banana	cytosol	74.15	59.41
GSMUA_Achr4P26370_001	Banana	plastid	63.97	56.84
KRH75587	Soybean	cytosol	64.75	54.75
KRH46546	Soybean	cytosol	64.49	54.65
GSMUA_Achr4P21670_001	Banana	cytosol	70.5	54.55
PGSC0003DMT400034161	Potato	cytosol	67.62	53.73
KRH04250	Soybean	cytosol	59.79	52.89
PGSC0003DMT400004624	Potato	plastid	59.27	52.42
Solyc10g061960.1.1	Tomato	cytosol	66.58	52.15
VIT_15s0021g01010.t01	Wine grape	cytosol	66.06	51.21
CDX76579	Canola	cytosol, endoplasmic reticulum, golgi	59.27	50.9
Bra021069.1-P	Field mustard	cytosol, golgi, plasma membrane	59.53	50.78
CDY35600	Canola	cytosol	59.53	45.97
CDY43465	Canola	cytosol	59.27	45.95
VIT_02s0012g00090.t01	Wine grape	mitochondrion	67.89	45.94
CDY67767	Canola	cytosol	59.27	45.13
AT2G35170.1	Thale cress	cytosol	56.66	44.83
AT4G17080.1	Thale cress	cytosol, peroxisome, plasma membrane	59.53	44.44
Solyc08g077730.2.1	Tomato	cytosol	59.27	43.4
HORVU5Hr1G067890.4	Barley	cytosol	39.69	36.63
HORVU7Hr1G122550.2	Barley	cytosol	10.97	12.43
HORVU4Hr1G006780.1	Barley	cytosol	20.37	10.76
HORVU4Hr1G046320.4	Barley	cytosol	20.37	10.36
HORVU6Hr1G093060.2	Barley	nucleus, plastid	21.15	9.95
HORVU4Hr1G025960.1	Barley	mitochondrion, plastid	20.63	9.75
HORVU2Hr1G107760.2	Barley	cytosol	20.63	9.74
HORVU4Hr1G006200.5	Barley	cytosol	19.84	9.68
HORVU5Hr1G042990.11	Barley	cytosol	19.84	9.61
HORVU7Hr1G122690.9	Barley	plastid	20.89	9.4
HORVU4Hr1G048470.2	Barley	cytosol, nucleus, plastid	6.79	5.19
HORVU4Hr1G061610.2	Barley	mitochondrion	7.05	5.1
HORVU2Hr1G022850.9	Barley	cytosol	5.74	4.09

Protein Annotations

EMBL:AK354742	EMBL:AK376977	EnsemblPlants:HORVU4Hr1G082070.1	EnsemblPlantsGene:HORVU4Hr1G082070	Gene3D:2.20.110.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:MORN	PANTHER:PTHR23084	PANTHER:PTHR23084:SF203	PFAM:PF02493
SEG:seg	SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix	UniParc:UPI000B472414	UniProt:A0A287PV77
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:621029858..621033296

Molecular Weight (calculated)

40523.9 Da

IEP (calculated)

9.692

GRAVY (calculated)

-0.353

Length

383 amino acids

Sequence
(BLAST)

001: FCPSXXXXXX XXXXXXXXXX XXXLLRCLHL RLRILLLLSL PTLYFLSPSP AILPRSLLAD FLSAAAFSCA LLLLLCLSLP RLPFPLPFHL PLRRPRRSPI
101: LWSIGSSPSA SASAPTTGHF VQVYSNGDVY EGQFNRGRCT GSGVYYYYMS GRYEGDWIDG KYDGYGVETW ARGSRYRGQY RQGLRHGHGV YRFYTGDVYS
201: GEWSNGQSHG YGVHTCEDGS RYIGEFKRGV KHGLGHYHFR NGDTYAGEYF ADRMHGFGVY SFANGHRYEG AWHEGRRQGL GMYTFRNGET QAGHWQNGVL
301: DTLSTQNIVP GSAIAVNHSK VLNAVQEARR ATEKAYDVPR VDDKVNRAVA AANKAANAAR VSAVKAAQKR IPNNNDDLPL SIV

Best Arabidopsis Sequence Match ( AT4G17080.1 )
(BLAST)

001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL

Arabidopsis Description

AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.