Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G17080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 72.52 | 68.42 |
| HORVU4Hr1G082070.1 | Barley | endoplasmic reticulum | 44.83 | 56.66 |
| PGSC0003DMT400004624 | Potato | plastid | 48.35 | 54.04 |
| KRH04250 | Soybean | cytosol | 46.07 | 51.5 |
| GSMUA_Achr2P10390_001 | Banana | cytosol | 48.35 | 48.95 |
| Os10t0565000-01 | Rice | cytosol, plastid | 46.9 | 48.61 |
| EER94469 | Sorghum | plastid | 45.66 | 48.57 |
| Zm00001d000053_P001 | Maize | cytosol, plastid | 45.45 | 48.46 |
| Zm00001d029979_P001 | Maize | plastid | 44.83 | 47.8 |
| TraesCSU01G007200.1 | Wheat | nucleus | 45.87 | 47.74 |
| Solyc08g077730.2.1 | Tomato | cytosol | 51.45 | 47.61 |
| HORVU1Hr1G055220.1 | Barley | cytosol | 46.07 | 47.55 |
| GSMUA_Achr4P21670_001 | Banana | cytosol | 47.93 | 46.87 |
| GSMUA_Achr4P26370_001 | Banana | plastid | 41.32 | 46.4 |
| VIT_02s0012g00090.t01 | Wine grape | mitochondrion | 53.31 | 45.58 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 36.36 | 41.81 |
| AT1G21920.1 | Thale cress | golgi, mitochondrion, peroxisome, plastid | 35.95 | 41.73 |
| AT1G10900.2 | Thale cress | cytosol | 17.36 | 11.14 |
| AT2G41210.1 | Thale cress | cytosol | 17.36 | 10.88 |
| AT1G21980.1 | Thale cress | cytosol | 16.74 | 10.77 |
| AT1G60890.2 | Thale cress | cytosol | 17.15 | 10.63 |
| AT2G26420.2 | Thale cress | cytosol | 15.7 | 10.57 |
| AT3G07960.1 | Thale cress | cytosol | 15.5 | 10.49 |
| AT3G56960.2 | Thale cress | cytosol | 16.74 | 10.4 |
| AT1G77740.1 | Thale cress | cytosol | 16.12 | 10.34 |
| AT3G09920.1 | Thale cress | cytosol | 16.32 | 9.69 |
| AT4G01190.2 | Thale cress | mitochondrion | 3.93 | 4.62 |
| AT1G01460.1 | Thale cress | cytosol | 3.31 | 3.75 |
Protein Annotations
| Gene3D:2.20.110.10 | MapMan:35.1 | EntrezGene:818084 | UniProt:A0A178VQ90 | ProteinID:AAC61819.1 | ProteinID:AEC09076.1 |
| ArrayExpress:AT2G35170 | EnsemblPlantsGene:AT2G35170 | RefSeq:AT2G35170 | TAIR:AT2G35170 | RefSeq:AT2G35170-TAIR-G | EnsemblPlants:AT2G35170.1 |
| TAIR:AT2G35170.1 | EMBL:AY058105 | EMBL:AY090312 | Unigene:At.26654 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0032259 | InterPro:MORN | RefSeq:NP_565799.1 | UniProt:O82174 | ProteinID:OAP07395.1 |
| PFAM:PF02493 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001078 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR23084 | PANTHER:PTHR23084:SF203 | SMART:SM00698 | SUPFAM:SSF82185 | TMHMM:TMhelix | UniParc:UPI00000A7CE4 |
| SEG:seg | : | : | : | : | : |
Description
At2g35170/T4C15.16 [Source:UniProtKB/TrEMBL;Acc:O82174]
Coordinates
chr2:+:14827360..14829844
Molecular Weight (calculated)
54780.9 Da
IEP (calculated)
10.073
GRAVY (calculated)
-0.480
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MHLKKSSVTE RRLIGKDDSD PNQIPNPIHH HHQTQNKNRT AIDNKGSGFT KYNHPQGQNH HHTVDIPTGV DHFRRRSARA RSGSISSFFP SNLLSSLSSY
101: RPVIARFLRK LLRYTLRARL ICFHLRFLLL LAVPPLYIFF LVINLRIFLR LVFVIIALSF ILSISLRFAL PHLTSIRLFV ARLLTFIPAR FSSSQPSTDR
201: VVWSIGSKPV AENNKTNSGS WVQKYGTNDM YEGEFHRGKC SGSGVYYYSM KGKYEGEWID GKYDGYGVET WSKGSRYRGQ YRLGLRHGIG VYTFYTGDVY
301: AGEWSNGQCH GCGVYTSEDG SRYDGEFKWG VKHGLGSYHF RNGDAYAGEY FADKMHGFGV YHFANGHKYE GAWHEGRRQG LGMYTFRNGD TQAGHWEDGV
401: LSCPTEQTIR PGSSFTISHS KVVDAVEQAR KAAEKAHEVV KVEERIKRAV MAANRAANAA RVAAVKAVQS QTFHRNDGDL ETNC
101: RPVIARFLRK LLRYTLRARL ICFHLRFLLL LAVPPLYIFF LVINLRIFLR LVFVIIALSF ILSISLRFAL PHLTSIRLFV ARLLTFIPAR FSSSQPSTDR
201: VVWSIGSKPV AENNKTNSGS WVQKYGTNDM YEGEFHRGKC SGSGVYYYSM KGKYEGEWID GKYDGYGVET WSKGSRYRGQ YRLGLRHGIG VYTFYTGDVY
301: AGEWSNGQCH GCGVYTSEDG SRYDGEFKWG VKHGLGSYHF RNGDAYAGEY FADKMHGFGV YHFANGHKYE GAWHEGRRQG LGMYTFRNGD TQAGHWEDGV
401: LSCPTEQTIR PGSSFTISHS KVVDAVEQAR KAAEKAHEVV KVEERIKRAV MAANRAANAA RVAAVKAVQS QTFHRNDGDL ETNC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.