Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, peroxisome, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- golgi 2
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031352.1-P | Field mustard | golgi, mitochondrion, peroxisome, plasma membrane | 88.01 | 85.95 |
| CDY04690 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 87.77 | 85.71 |
| CDY30636 | Canola | mitochondrion | 87.77 | 85.71 |
| Bra012299.1-P | Field mustard | mitochondrion | 85.85 | 85.44 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 81.3 | 85.39 |
| CDY38830 | Canola | plastid | 81.3 | 85.39 |
| CDX96565 | Canola | plastid | 81.3 | 85.39 |
| Bra016399.1-P | Field mustard | cytosol, golgi, mitochondrion, nucleus | 86.57 | 85.14 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 81.06 | 85.14 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 74.1 | 73.4 |
| Os08t0469700-01 | Rice | cytosol | 43.65 | 65.23 |
| VIT_18s0001g03290.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane, plastid | 65.23 | 64.61 |
| GSMUA_Achr3P07060_001 | Banana | mitochondrion | 51.32 | 61.32 |
| KRH26231 | Soybean | plastid | 24.7 | 60.23 |
| GSMUA_Achr8P23250_001 | Banana | mitochondrion | 51.32 | 60.11 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 60.91 | 59.48 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 60.67 | 59.11 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 59.23 | 58.95 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 58.51 | 57.96 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 48.44 | 57.55 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 58.03 | 56.28 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 46.28 | 56.1 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 54.44 | 55.91 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 20.62 | 55.84 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 58.03 | 55.76 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 54.2 | 55.66 |
| TraesCS5A01G236200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 53.96 | 55.42 |
| TraesCS5B01G234500.1 | Wheat | cytosol, golgi, plasma membrane | 53.96 | 54.88 |
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 54.2 | 54.72 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 54.68 | 54.55 |
| KXG35752 | Sorghum | plastid | 54.2 | 53.55 |
| Zm00001d031777_P001 | Maize | cytosol, golgi, plasma membrane | 51.08 | 52.85 |
| KRH16298 | Soybean | plastid | 57.31 | 52.53 |
| OQU80624 | Sorghum | cytosol, golgi, plasma membrane | 51.8 | 51.8 |
| Zm00001d050008_P001 | Maize | cytosol, golgi, plasma membrane | 50.6 | 50.72 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 46.52 | 46.75 |
| Zm00001d038430_P001 | Maize | cytosol, golgi, plasma membrane | 29.98 | 43.71 |
| AT2G35170.1 | Thale cress | cytosol | 41.73 | 35.95 |
| AT4G17080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 43.41 | 35.28 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 51.8 | 30.55 |
| AT1G21980.1 | Thale cress | cytosol | 20.86 | 11.57 |
| AT2G41210.1 | Thale cress | cytosol | 20.62 | 11.14 |
| AT3G07960.1 | Thale cress | cytosol | 18.47 | 10.77 |
| AT1G77740.1 | Thale cress | cytosol | 19.42 | 10.74 |
| AT1G10900.2 | Thale cress | cytosol | 19.42 | 10.74 |
| AT1G60890.2 | Thale cress | cytosol | 19.42 | 10.37 |
| AT3G56960.2 | Thale cress | cytosol | 19.18 | 10.27 |
| AT2G26420.2 | Thale cress | cytosol | 17.51 | 10.15 |
| AT3G09920.1 | Thale cress | cytosol | 18.47 | 9.45 |
| AT4G01190.2 | Thale cress | mitochondrion | 3.84 | 3.89 |
| AT1G01460.1 | Thale cress | cytosol | 3.6 | 3.51 |
Protein Annotations
| Gene3D:2.20.110.10 | MapMan:35.1 | EntrezGene:838794 | ProteinID:AAF16539.1 | ProteinID:AEE30172.1 | EMBL:AF370285 |
| ArrayExpress:AT1G21920 | EnsemblPlantsGene:AT1G21920 | RefSeq:AT1G21920 | TAIR:AT1G21920 | RefSeq:AT1G21920-TAIR-G | EnsemblPlants:AT1G21920.1 |
| TAIR:AT1G21920.1 | EMBL:AY150425 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008168 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | GO:GO:0032259 | InterPro:MORN | RefSeq:NP_173610.1 | PFAM:PF02493 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR23084 | PANTHER:PTHR23084:SF176 | UniProt:Q9SFE3 | SMART:SM00698 | SUPFAM:SSF82185 | TMHMM:TMhelix |
| UniParc:UPI0000042339 | SEG:seg | : | : | : | : |
Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
Coordinates
chr1:-:7704173..7706254
Molecular Weight (calculated)
46518.4 Da
IEP (calculated)
9.787
GRAVY (calculated)
-0.544
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.