CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01306	Canola	cytosol, golgi, mitochondrion, plastid	98.49	98.49
Bra012299.1-P	Field mustard	mitochondrion	97.73	92.6
CDY38830	Canola	plastid	85.89	85.89
CDX96565	Canola	plastid	85.89	85.89
CDY04690	Canola	golgi, mitochondrion, peroxisome, plasma membrane	90.68	84.31
CDY30636	Canola	mitochondrion	90.18	83.84
AT1G21920.1	Thale cress	golgi, mitochondrion, peroxisome, plastid	85.39	81.3
CDX88382	Canola	cytosol, golgi, mitochondrion, plasma membrane	66.5	68.57
CDY44523	Canola	plastid	68.01	67.16
CDY38331	Canola	cytosol, golgi, mitochondrion, plasma membrane	69.27	66.27
Os08t0469700-01	Rice	cytosol	45.34	64.52
VIT_18s0001g03290.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane, plastid	64.74	61.05
KRH26231	Soybean	plastid	25.94	60.23
GSMUA_Achr8P23250_001	Banana	mitochondrion	52.39	58.43
PGSC0003DMT400002402	Potato	cytosol, golgi, mitochondrion, nucleus	62.72	58.31
GSMUA_Achr3P07060_001	Banana	mitochondrion	51.13	58.17
Solyc11g013010.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	62.47	57.94
CDX79226	Canola	cytosol	23.17	56.44
PGSC0003DMT400045267	Potato	cytosol, golgi, mitochondrion, plasma membrane	59.45	56.32
Solyc06g060410.2.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	58.44	55.11
Zm00001d020697_P001	Maize	cytosol, golgi, plasma membrane, plastid	56.17	54.93
GSMUA_Achr1P21340_001	Banana	endoplasmic reticulum, golgi	48.36	54.7
TraesCS5A01G236200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	55.92	54.68
Zm00001d005849_P001	Maize	cytosol, golgi, plasma membrane	55.92	54.68
KRH53208	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	59.19	54.65
KRH64714	Soybean	cytosol, peroxisome, plasma membrane, plastid	59.7	54.61
TraesCS2B01G252100.1	Wheat	cytosol	21.16	54.55
TraesCS5B01G234500.1	Wheat	cytosol, golgi, plasma membrane	55.92	54.15
TraesCS5D01G243200.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	56.17	54.0
Os09t0453900-01	Rice	cytosol, golgi, plasma membrane	56.42	53.59
GSMUA_Achr5P17600_001	Banana	endoplasmic reticulum, plasma membrane	46.1	53.2
KXG35752	Sorghum	plastid	55.67	52.37
Zm00001d031777_P001	Maize	cytosol, golgi, plasma membrane	52.9	52.11
KRH16298	Soybean	plastid	58.69	51.21
OQU80624	Sorghum	cytosol, golgi, plasma membrane	53.65	51.08
Zm00001d050008_P001	Maize	cytosol, golgi, plasma membrane	52.39	50.0
HORVU5Hr1G067890.4	Barley	cytosol	48.11	46.02
Zm00001d038430_P001	Maize	cytosol, golgi, plasma membrane	31.23	43.36
CDX76579	Canola	cytosol, endoplasmic reticulum, golgi	42.32	37.67
CDY35600	Canola	cytosol	43.58	34.88
CDY43465	Canola	cytosol	43.07	34.62
CDY67767	Canola	cytosol	43.58	34.39
GSMUA_Achr7P18850_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	52.14	29.28
CDY47390	Canola	cytosol	13.35	21.81
CDY07965	Canola	nucleus	13.85	18.97
CDX74021	Canola	nucleus	13.85	18.97
CDX72088	Canola	cytosol	15.11	17.65
CDX76021	Canola	cytosol	13.35	16.16
CDX96562	Canola	cytosol	21.91	11.85
CDY35423	Canola	cytosol	21.66	11.3
CDY22511	Canola	cytosol	21.66	11.3
CDX79949	Canola	cytosol	21.41	11.0
CDY23866	Canola	cytosol	21.41	11.0
CDY14647	Canola	cytosol	20.4	10.99
CDY64062	Canola	cytosol	20.4	10.95
CDY38833	Canola	cytosol	19.65	10.86
CDX97920	Canola	cytosol	20.4	10.67
CDY22147	Canola	cytosol	19.14	10.64
CDY19330	Canola	cytosol	20.4	10.53
CDY11484	Canola	cytosol	18.89	10.25
CDY12865	Canola	cytosol	19.9	10.14
CDY27172	Canola	cytosol	19.9	10.12
CDY40487	Canola	cytosol	20.15	10.08
CDY54607	Canola	nucleus	20.15	9.8
CDY41570	Canola	nucleus	20.15	9.78
CDY47393	Canola	cytosol	2.02	7.77
CDY34670	Canola	cytosol	12.34	7.22
CDY34857	Canola	cytosol	12.09	7.07
CDX76709	Canola	cytosol	18.64	5.83
CDY47391	Canola	mitochondrion	4.79	5.52
CDX74020	Canola	mitochondrion	5.29	5.44
CDX72087	Canola	cytosol	5.29	5.43
CDY07964	Canola	mitochondrion	5.04	5.26
CDX67667	Canola	mitochondrion	5.29	5.12
CDY59828	Canola	mitochondrion	5.29	5.12
CDX76024	Canola	cytosol	2.02	4.52
CDY52812	Canola	cytosol	4.53	4.25
CDX76022	Canola	cytosol, mitochondrion	2.77	4.14
CDX90034	Canola	cytosol	3.78	3.53
CDY15175	Canola	cytosol	3.78	3.53
CDY11485	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY00407	EnsemblPlantsGene:GSBRNA2T00110043001	Gene3D:2.20.110.10	GO:A0A078EH16	InterPro:MORN	ncoils:Coil
PANTHER:PTHR23084	PANTHER:PTHR23084:SF176	PFAM:PF02493	ProteinID:CDY00407	ProteinID:CDY00407.1	SEG:seg
SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix	UniParc:UPI0004EEA1A0	MapMan:35.1	:

Description

BnaC07g14190D

Coordinates

chrLK031918:-:724515..726026

Molecular Weight (calculated)

44367.9 Da

IEP (calculated)

10.004

GRAVY (calculated)

-0.695

Length

397 amino acids

Sequence
(BLAST)

001: MEGQAKLTRT QSSLLRSPST VRSSFHIFNL ISDDVPHQKQ DLEAGEKEEK QRRYPRKPFG SSPRTGLTRI NPGLAFTMLL TSENLLLALI FVAVALFLAS
101: KNKTLLNQTV LAIAKGFKSK NRSKPVQWYI GDTETKPEKA TKRFVKEGVQ FYSNGDFYEG EFHKGKCNGS GVYYYFVRGR YEGDWVDGRY DGHGIESWAR
201: GSRYKGQYRH GLRHGYGVYR FYTGDCYAGE WLNGQSHGFG VQSCADGSSY VGESRFGVKH GLGSYHFRNG DKYAGEYFGD KIHGFGVYRF ANGHCYEGAW
301: HEGRKQGYGA YSFRTGDAKS GEWDSGNLVT SLHSTSEPVR RAIQAARETA KKAAENRRRV DEQVSRAVAA ANKAATAARV AAVKAVQNQM DGKFCQS

Best Arabidopsis Sequence Match ( AT1G21920.1 )
(BLAST)

001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS

Arabidopsis Description

Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.