Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- golgi 2
- extracellular 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38331 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 98.51 | 95.42 |
| CDX88382 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 80.1 | 83.64 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 82.09 | 78.38 |
| CDX79226 | Canola | cytosol | 27.86 | 68.71 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 67.41 | 68.26 |
| CDY38830 | Canola | plastid | 67.16 | 68.01 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 67.16 | 68.01 |
| CDX96565 | Canola | plastid | 66.92 | 67.76 |
| CDY04690 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 70.4 | 66.28 |
| CDY30636 | Canola | mitochondrion | 69.9 | 65.81 |
| VIT_18s0001g03290.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane, plastid | 63.93 | 61.05 |
| Os08t0469700-01 | Rice | cytosol | 42.29 | 60.93 |
| KRH26231 | Soybean | plastid | 25.12 | 59.06 |
| GSMUA_Achr8P23250_001 | Banana | mitochondrion | 49.75 | 56.18 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 59.45 | 55.97 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 58.21 | 55.85 |
| GSMUA_Achr3P07060_001 | Banana | mitochondrion | 48.01 | 55.3 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 58.46 | 54.91 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 57.21 | 54.63 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 57.71 | 53.95 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 56.97 | 52.77 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 45.52 | 52.14 |
| KRH16298 | Soybean | plastid | 58.71 | 51.87 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 44.28 | 51.74 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 50.99 | 50.49 |
| TraesCS5A01G236200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 50.75 | 50.25 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 50.75 | 50.25 |
| TraesCS5B01G234500.1 | Wheat | cytosol, golgi, plasma membrane | 50.99 | 50.0 |
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 50.5 | 49.15 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 50.99 | 49.04 |
| Zm00001d031777_P001 | Maize | cytosol, golgi, plasma membrane | 49.01 | 48.88 |
| KXG35752 | Sorghum | plastid | 50.99 | 48.58 |
| OQU80624 | Sorghum | cytosol, golgi, plasma membrane | 49.75 | 47.96 |
| Zm00001d050008_P001 | Maize | cytosol, golgi, plasma membrane | 48.26 | 46.63 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 17.16 | 44.81 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 43.28 | 41.93 |
| Zm00001d038430_P001 | Maize | cytosol, golgi, plasma membrane | 28.61 | 40.21 |
| CDX76579 | Canola | cytosol, endoplasmic reticulum, golgi | 41.29 | 37.22 |
| CDY35600 | Canola | cytosol | 43.28 | 35.08 |
| CDY43465 | Canola | cytosol | 42.54 | 34.62 |
| CDY67767 | Canola | cytosol | 42.79 | 34.19 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 49.75 | 28.29 |
| CDY47390 | Canola | cytosol | 13.43 | 22.22 |
| CDY07965 | Canola | nucleus | 13.43 | 18.62 |
| CDX74021 | Canola | nucleus | 13.43 | 18.62 |
| CDX72088 | Canola | cytosol | 15.17 | 17.94 |
| CDX76021 | Canola | cytosol | 13.43 | 16.46 |
| CDX96562 | Canola | cytosol | 21.39 | 11.72 |
| CDY35423 | Canola | cytosol | 20.65 | 10.91 |
| CDY22511 | Canola | cytosol | 20.65 | 10.91 |
| CDY23866 | Canola | cytosol | 20.65 | 10.74 |
| CDY38833 | Canola | cytosol | 19.15 | 10.72 |
| CDX97920 | Canola | cytosol | 20.15 | 10.67 |
| CDY11484 | Canola | cytosol | 19.4 | 10.66 |
| CDY12865 | Canola | cytosol | 20.65 | 10.65 |
| CDX79949 | Canola | cytosol | 20.4 | 10.61 |
| CDY14647 | Canola | cytosol | 19.4 | 10.58 |
| CDY64062 | Canola | cytosol | 19.4 | 10.54 |
| CDY19330 | Canola | cytosol | 20.15 | 10.53 |
| CDY22147 | Canola | cytosol | 18.66 | 10.5 |
| CDY40487 | Canola | cytosol | 20.65 | 10.45 |
| CDY27172 | Canola | cytosol | 19.4 | 9.99 |
| CDY54607 | Canola | nucleus | 19.4 | 9.56 |
| CDY41570 | Canola | nucleus | 19.15 | 9.41 |
| CDY34670 | Canola | cytosol | 12.69 | 7.51 |
| CDY34857 | Canola | cytosol | 12.44 | 7.36 |
| CDY47393 | Canola | cytosol | 1.74 | 6.8 |
| CDX76709 | Canola | cytosol | 19.15 | 6.06 |
| CDX74020 | Canola | mitochondrion | 5.22 | 5.44 |
| CDY07964 | Canola | mitochondrion | 4.98 | 5.26 |
| CDX72087 | Canola | cytosol | 4.98 | 5.17 |
| CDY47391 | Canola | mitochondrion | 4.23 | 4.94 |
| CDX67667 | Canola | mitochondrion | 4.98 | 4.88 |
| CDY59828 | Canola | mitochondrion | 4.98 | 4.88 |
| CDX76024 | Canola | cytosol | 1.74 | 3.95 |
| CDX76022 | Canola | cytosol, mitochondrion | 2.49 | 3.76 |
| CDY52812 | Canola | cytosol | 3.48 | 3.3 |
| CDX90034 | Canola | cytosol | 3.23 | 3.06 |
| CDY15175 | Canola | cytosol | 3.23 | 3.06 |
| CDY11485 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.20.110.10 | MapMan:35.1 | GO:A0A078I5Z8 | UniProt:A0A078I5Z8 | EnsemblPlants:CDY44523 | ProteinID:CDY44523 |
| ProteinID:CDY44523.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00080308001 | InterPro:MORN |
| PFAM:PF02493 | PANTHER:PTHR23084 | PANTHER:PTHR23084:SF176 | SMART:SM00698 | SUPFAM:SSF82185 | TMHMM:TMhelix |
| UniParc:UPI0004EEF290 | SEG:seg | : | : | : | : |
Description
BnaCnng11340DBnaCnng11340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5Z8]
Coordinates
chrLK032593:+:75445..77233
Molecular Weight (calculated)
45161.0 Da
IEP (calculated)
9.961
GRAVY (calculated)
-0.651
Length
402 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQSKLTRTQ SSLLRSSPTI RSSIHSLSSI TEREKEEKQR RSKKQSKSIN RTGLIRIKPG LTFTLASLSL ASFLLFSVFF SQTGTSENLL LGLIFLAVAL
101: FFASRNMAVI NQTVLAIKQT SKKLTLRTKP KPVQWYIGDS KPEQTKPEEF VREGVQLFSN GDIYEGEFNR GRSQGSGVYY YYVNGRYEGD WVNGRYDGYG
201: IESWSKGSKY KGQYKQGTRH GYGVYWFYTG DSYSGEWFNG QSHGFGVQTC ADGSSYVGEF KFGVKHGLGS YHFRNGDKYA GEYYGDKIHG FGVYHFANGH
301: YYEGAWHEGR KQGYGTYGFR TGDAKCGEWD DGHLVNRLPL ETGPVHKAVQ NAQEMARRGV DQRRVDEQVR RAVAAANKAA TAARVAAVKA VQNQMDGKLC
401: EQ
101: FFASRNMAVI NQTVLAIKQT SKKLTLRTKP KPVQWYIGDS KPEQTKPEEF VREGVQLFSN GDIYEGEFNR GRSQGSGVYY YYVNGRYEGD WVNGRYDGYG
201: IESWSKGSKY KGQYKQGTRH GYGVYWFYTG DSYSGEWFNG QSHGFGVQTC ADGSSYVGEF KFGVKHGLGS YHFRNGDKYA GEYYGDKIHG FGVYHFANGH
301: YYEGAWHEGR KQGYGTYGFR TGDAKCGEWD DGHLVNRLPL ETGPVHKAVQ NAQEMARRGV DQRRVDEQVR RAVAAANKAA TAARVAAVKA VQNQMDGKLC
401: EQ
001: MSQKKLTRTQ SSLLRSSPTI RSSIQSLSSI TECDDFNETS HHRREQDLEA GEKEEKQRRR KPVKSFGSMN RIKPGLAFTL ACLSFLSLSS FLLFFVDEIF
101: TSENLLLGLI FVALALFFAS RNMAVINQTV IAIKQIRVRS RIKHKPKPVQ WYIGDSKPEP IKEEETRLVV KEGVQFFSNG DFYEGEFNRG KCNGSGVYYY
201: YVNGRYEGDW INGRYDGYGI ECWSKGSKYK GQYKQGLRHG FGVYWFYTGD SYSGEWFNGQ SHGFGVQTCA DGSSFVGEFK FGVKHGLGSY HFRNGDKYAG
301: EYFGDKIHGF GVYHFANGHY YEGAWHEGRK QGYGTYRFRT GDIKSGEWDD GNLVNHLPLD SDPVRRAVQS ARERAKNGVN QRRIDEQVIR AVAAANKAAT
401: AARVAAVKAV QNQMDGKICD N
101: TSENLLLGLI FVALALFFAS RNMAVINQTV IAIKQIRVRS RIKHKPKPVQ WYIGDSKPEP IKEEETRLVV KEGVQFFSNG DFYEGEFNRG KCNGSGVYYY
201: YVNGRYEGDW INGRYDGYGI ECWSKGSKYK GQYKQGLRHG FGVYWFYTGD SYSGEWFNGQ SHGFGVQTCA DGSSFVGEFK FGVKHGLGSY HFRNGDKYAG
301: EYFGDKIHGF GVYHFANGHY YEGAWHEGRK QGYGTYRFRT GDIKSGEWDD GNLVNHLPLD SDPVRRAVQS ARERAKNGVN QRRIDEQVIR AVAAANKAAT
401: AARVAAVKAV QNQMDGKICD N
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9CAP2]
SUBAcon: [plastid,cytosol,plasma membrane,mitochondrion]
SUBAcon: [plastid,cytosol,plasma membrane,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.