Factsheet for TraesCS5B01G234500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, golgi, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G243200.1	Wheat	cytosol, endoplasmic reticulum, golgi, plastid	97.32	96.61
Os09t0453900-01	Rice	cytosol, golgi, plasma membrane	88.78	87.08
Zm00001d020697_P001	Maize	cytosol, golgi, plasma membrane, plastid	84.63	85.47
Zm00001d005849_P001	Maize	cytosol, golgi, plasma membrane	84.63	85.47
TraesCS2B01G252100.1	Wheat	cytosol	31.71	84.42
KXG35752	Sorghum	plastid	86.83	84.36
HORVU5Hr1G067890.4	Barley	cytosol	81.22	80.24
KRH26231	Soybean	plastid	25.61	61.4
GSMUA_Achr1P21340_001	Banana	endoplasmic reticulum, golgi	52.2	60.97
VIT_18s0001g03290.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane, plastid	61.71	60.09
GSMUA_Achr5P17600_001	Banana	endoplasmic reticulum, plasma membrane	49.51	59.01
Solyc11g013010.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	59.27	56.78
PGSC0003DMT400002402	Potato	cytosol, golgi, mitochondrion, nucleus	58.54	56.21
PGSC0003DMT400045267	Potato	cytosol, golgi, mitochondrion, plasma membrane	57.32	56.09
CDY01306	Canola	cytosol, golgi, mitochondrion, plastid	54.15	55.92
CDY38830	Canola	plastid	54.15	55.92
CDY00407	Canola	cytosol, golgi, mitochondrion, plastid	54.15	55.92
CDX96565	Canola	plastid	54.15	55.92
KRH53208	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	57.07	54.42
Solyc06g060410.2.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	55.85	54.39
AT1G21920.1	Thale cress	golgi, mitochondrion, peroxisome, plastid	54.88	53.96
KRH64714	Soybean	cytosol, peroxisome, plasma membrane, plastid	57.07	53.92
CDY30636	Canola	mitochondrion	55.61	53.4
Bra031352.1-P	Field mustard	golgi, mitochondrion, peroxisome, plasma membrane	55.61	53.4
CDY04690	Canola	golgi, mitochondrion, peroxisome, plasma membrane	55.37	53.16
Bra016399.1-P	Field mustard	cytosol, golgi, mitochondrion, nucleus	54.63	52.83
Bra012299.1-P	Field mustard	mitochondrion	53.66	52.51
CDX88382	Canola	cytosol, golgi, mitochondrion, plasma membrane	48.54	51.69
CDY44523	Canola	plastid	50.0	50.99
AT1G77660.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	51.71	50.36
KRH16298	Soybean	plastid	55.85	50.33
CDX79226	Canola	cytosol	20.0	50.31
CDY38331	Canola	cytosol, golgi, mitochondrion, plasma membrane	50.0	49.4
Bra008321.1-P	Field mustard	mitochondrion	50.0	49.4
GSMUA_Achr7P18850_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	58.54	33.95
TraesCS4B01G059200.1	Wheat	mitochondrion	6.34	18.31
TraesCS3B01G045800.1	Wheat	cytosol	6.1	17.73
TraesCS2B01G152700.1	Wheat	cytosol	21.71	11.41
TraesCS4B01G042400.1	Wheat	cytosol	20.24	11.37
TraesCS4B01G157800.3	Wheat	cytosol	20.49	11.28
TraesCS5B01G132400.1	Wheat	mitochondrion, plastid	20.49	10.69
TraesCS4B01G133100.1	Wheat	mitochondrion, plastid	20.98	10.46
TraesCS6B01G451200.2	Wheat	nucleus, plastid	20.49	10.32
TraesCS2B01G503400.1	Wheat	cytosol	19.51	9.99
TraesCS4B01G039400.2	Wheat	cytosol	18.05	9.67
TraesCS7B01G489300.1	Wheat	plastid	19.51	9.48
TraesCS4B01G216900.1	Wheat	cytosol	8.05	6.23
TraesCS5B01G001700.1	Wheat	cytosol	8.05	6.16
TraesCS4B01G152500.1	Wheat	cytosol	5.37	5.74
TraesCS3B01G472100.1	Wheat	cytosol	8.05	5.73

Protein Annotations

EnsemblPlants:TraesCS5B01G234500.1	EnsemblPlantsGene:TraesCS5B01G234500	Gene3D:2.20.110.10	InterPro:MORN	PANTHER:PTHR23084	PANTHER:PTHR23084:SF176
PFAM:PF02493	SEG:seg	SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr5B:-:412461649..412463215

Molecular Weight (calculated)

44750.5 Da

IEP (calculated)

9.509

GRAVY (calculated)

-0.580

Length

410 amino acids

Sequence
(BLAST)

001: MDGHGAGAGK LTRTPSSLLR SPTVRNCSSF QAVLVEDPEP DDKKSQAPAQ GKALHPHRLR PGGPPHPALI LALPLALLLL LLLLRDDRHL LLLAAAATAA
101: LAAAAAAARL LRGRLRMRRS SQTGSVQWFI GDEDDRTHHA RDNGKGRGGA AAHGRVVREG VEFYSNGDCY EGEFHKGRCN GSGVYNFFGK GKYEGDWVDG
201: KYDGYGIESW ARGSRYRGQY RQGLRHGHGV YRFYSGDCYA GEWAGGQSHG IGAQTCSDGS SYVGEFKCGV KHGLGSYHFR NGDRYAGEYF GDKIHGFGVY
301: RFANGHCYEG SWHEGKKQGF GMYTFRNGDK RSGEWDFGTL KSPLPPTDPS VERAVQAAQR AAENAFHLPR VDEQVHKVVM AANRAATAAR VAAIKAVQNR
401: MDGKFCDTYV

Best Arabidopsis Sequence Match ( AT1G21920.1 )
(BLAST)

001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS

Arabidopsis Description

Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.