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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX96565 Canola plastid 99.24 99.24
CDY00407 Canola cytosol, golgi, mitochondrion, plastid 85.89 85.89
CDY01306 Canola cytosol, golgi, mitochondrion, plastid 85.64 85.64
CDY04690 Canola golgi, mitochondrion, peroxisome, plasma membrane 90.93 84.54
CDY30636 Canola mitochondrion 90.93 84.54
AT1G21920.1 Thale cress golgi, mitochondrion, peroxisome, plastid 85.39 81.3
CDX88382 Canola cytosol, golgi, mitochondrion, plasma membrane 66.25 68.31
CDY38331 Canola cytosol, golgi, mitochondrion, plasma membrane 70.28 67.23
CDY44523 Canola plastid 68.01 67.16
Os08t0469700-01 Rice cytosol 45.59 64.87
VIT_18s0001g03290.t01 Wine grape cytosol, golgi, mitochondrion, plasma membrane, plastid 66.25 62.47
KRH26231 Soybean plastid 26.45 61.4
PGSC0003DMT400002402 Potato cytosol, golgi, mitochondrion, nucleus 64.48 59.95
GSMUA_Achr3P07060_001 Banana mitochondrion 52.14 59.31
GSMUA_Achr8P23250_001 Banana mitochondrion 53.15 59.27
Solyc11g013010.1.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 63.22 58.64
CDX79226 Canola cytosol 23.68 57.67
PGSC0003DMT400045267 Potato cytosol, golgi, mitochondrion, plasma membrane 59.95 56.8
KRH53208 Soybean cytosol, mitochondrion, peroxisome, plasma membrane 60.71 56.05
KRH64714 Soybean cytosol, peroxisome, plasma membrane, plastid 61.21 55.99
Zm00001d020697_P001 Maize cytosol, golgi, plasma membrane, plastid 57.18 55.91
Solyc06g060410.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 59.19 55.82
Zm00001d005849_P001 Maize cytosol, golgi, plasma membrane 56.93 55.66
TraesCS5A01G236200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion 56.17 54.93
GSMUA_Achr1P21340_001 Banana endoplasmic reticulum, golgi 48.36 54.7
Os09t0453900-01 Rice cytosol, golgi, plasma membrane 57.43 54.55
GSMUA_Achr5P17600_001 Banana endoplasmic reticulum, plasma membrane 47.1 54.36
TraesCS5B01G234500.1 Wheat cytosol, golgi, plasma membrane 55.92 54.15
TraesCS5D01G243200.1 Wheat cytosol, endoplasmic reticulum, golgi, plastid 56.17 54.0
TraesCS2B01G252100.1 Wheat cytosol 20.91 53.9
KXG35752 Sorghum plastid 56.68 53.32
KRH16298 Soybean plastid 59.19 51.65
Zm00001d031777_P001 Maize cytosol, golgi, plasma membrane 52.14 51.36
OQU80624 Sorghum cytosol, golgi, plasma membrane 53.15 50.6
Zm00001d050008_P001 Maize cytosol, golgi, plasma membrane 51.64 49.28
HORVU5Hr1G067890.4 Barley cytosol 48.61 46.51
Zm00001d038430_P001 Maize cytosol, golgi, plasma membrane 30.98 43.01
CDX76579 Canola cytosol, endoplasmic reticulum, golgi 43.58 38.79
CDY43465 Canola cytosol 43.58 35.02
CDY35600 Canola cytosol 43.58 34.88
CDY67767 Canola cytosol 43.32 34.19
GSMUA_Achr7P18850_001 Banana endoplasmic reticulum, plasma membrane, vacuole 52.14 29.28
CDY47390 Canola cytosol 14.11 23.05
CDX74021 Canola nucleus 14.11 19.31
CDY07965 Canola nucleus 14.11 19.31
CDX72088 Canola cytosol 15.11 17.65
CDX76021 Canola cytosol 14.11 17.07
CDX96562 Canola cytosol 21.41 11.58
CDY35423 Canola cytosol 21.66 11.3
CDY22511 Canola cytosol 21.66 11.3
CDX79949 Canola cytosol 21.66 11.13
CDY23866 Canola cytosol 21.66 11.13
CDY14647 Canola cytosol 20.15 10.85
CDY64062 Canola cytosol 20.15 10.81
CDY22147 Canola cytosol 19.4 10.78
CDX97920 Canola cytosol 20.4 10.67
CDY38833 Canola cytosol 19.14 10.59
CDY19330 Canola cytosol 20.4 10.53
CDY27172 Canola cytosol 20.4 10.37
CDY12865 Canola cytosol 19.9 10.14
CDY11484 Canola cytosol 18.64 10.11
CDY40487 Canola cytosol 20.15 10.08
CDY54607 Canola nucleus 20.15 9.8
CDY41570 Canola nucleus 20.15 9.78
CDY47393 Canola cytosol 2.02 7.77
CDY34670 Canola cytosol 12.34 7.22
CDY34857 Canola cytosol 12.09 7.07
CDY47391 Canola mitochondrion 5.04 5.81
CDX76709 Canola cytosol 18.39 5.75
CDX72087 Canola cytosol 5.54 5.68
CDX74020 Canola mitochondrion 5.29 5.44
CDX67667 Canola mitochondrion 5.54 5.37
CDY59828 Canola mitochondrion 5.54 5.37
CDY07964 Canola mitochondrion 5.04 5.26
CDX76024 Canola cytosol 2.02 4.52
CDX76022 Canola cytosol, mitochondrion 3.02 4.51
CDY52812 Canola cytosol 3.78 3.54
CDX90034 Canola cytosol 3.53 3.29
CDY15175 Canola cytosol 3.53 3.29
CDY11485 Canola cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:CDY38830EnsemblPlantsGene:GSBRNA2T00066654001Gene3D:2.20.110.10GO:A0A078HJY5GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:MORNPANTHER:PTHR23084PANTHER:PTHR23084:SF176PFAM:PF02493ProteinID:CDY38830
ProteinID:CDY38830.1SEG:segSMART:SM00698SUPFAM:SSF82185TMHMM:TMhelixUniParc:UPI0004EE825D
UniProt:A0A078HJY5MapMan:35.1::::
Description
BnaC08g20040DBnaC08g20040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJY5]
Coordinates
chrLK032433:-:218882..220775
Molecular Weight (calculated)
44465.0 Da
IEP (calculated)
9.643
GRAVY (calculated)
-0.594
Length
397 amino acids
Sequence
(BLAST)
001: MEGQAKLTRT QSSLLRSPST TVRSSFQSLS VIASEVSHQR QDLEAGEKEE KQRRKPPKPL SSFIFFVVFS QTDELLTSEN LLLALIFVAV ALFFASKNIA
101: LLNQTILALK ETTKLFGFHS KNRSEPVQWY IGDTETKPEK KIKPFVKEGV HFYSNGDFYE GEFHKGKCNG SGVYYYFVRG RYEGDWVDGR YDGHGIESWA
201: RGSRYKGQYR QGLRHGYGVY RFYTGDCYAG EWLNGQSHGF GVQSCADGSS YVGESRFGVK HGLGSYHFRN GDKYAGEYFG DKIHGFGVYR FANGHCYEGA
301: WHEGRKQGYG AYSFRTGDAK SGEWDSGNLV AFLHPTSEPV RRAVQAARET AKKAVTRRRV DEQVSRAVAA ANKAATAARV AAVKAVQNQM DGNFCQS
Best Arabidopsis Sequence Match ( AT1G21920.1 )
(BLAST)
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.