Factsheet for Zm00001d038430_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050008_P001	Maize	cytosol, golgi, plasma membrane	97.9	67.31
KRH26231	Soybean	plastid	35.31	59.06
Zm00001d031777_P001	Maize	cytosol, golgi, plasma membrane	83.22	59.06
OQU80624	Sorghum	cytosol, golgi, plasma membrane	84.97	58.27
Zm00001d005849_P001	Maize	cytosol, golgi, plasma membrane	67.83	47.78
Zm00001d020697_P001	Maize	cytosol, golgi, plasma membrane, plastid	66.43	46.8
Os08t0469700-01	Rice	cytosol	41.26	42.29
GSMUA_Achr1P21340_001	Banana	endoplasmic reticulum, golgi	41.61	33.9
GSMUA_Achr5P17600_001	Banana	endoplasmic reticulum, plasma membrane	39.16	32.56
VIT_18s0001g03290.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane, plastid	47.9	32.54
Solyc11g013010.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	48.25	32.24
PGSC0003DMT400002402	Potato	cytosol, golgi, mitochondrion, nucleus	47.55	31.85
PGSC0003DMT400045267	Potato	cytosol, golgi, mitochondrion, plasma membrane	45.8	31.26
CDY01306	Canola	cytosol, golgi, mitochondrion, plastid	43.36	31.23
CDY00407	Canola	cytosol, golgi, mitochondrion, plastid	43.36	31.23
CDY38830	Canola	plastid	43.01	30.98
CDX96565	Canola	plastid	43.01	30.98
Solyc06g060410.2.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	45.45	30.88
CDY30636	Canola	mitochondrion	45.1	30.21
Bra031352.1-P	Field mustard	golgi, mitochondrion, peroxisome, plasma membrane	45.1	30.21
Bra012299.1-P	Field mustard	mitochondrion	44.06	30.07
CDY04690	Canola	golgi, mitochondrion, peroxisome, plasma membrane	44.76	29.98
AT1G21920.1	Thale cress	golgi, mitochondrion, peroxisome, plastid	43.71	29.98
Bra016399.1-P	Field mustard	cytosol, golgi, mitochondrion, nucleus	44.41	29.95
KRH16298	Soybean	plastid	45.8	28.79
CDY44523	Canola	plastid	40.21	28.61
KRH53208	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	43.01	28.6
KRH64714	Soybean	cytosol, peroxisome, plasma membrane, plastid	43.36	28.57
CDX88382	Canola	cytosol, golgi, mitochondrion, plasma membrane	38.46	28.57
Bra008321.1-P	Field mustard	mitochondrion	40.91	28.19
CDY38331	Canola	cytosol, golgi, mitochondrion, plasma membrane	40.91	28.19
AT1G77660.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	40.56	27.55
Zm00001d000053_P001	Maize	cytosol, plastid	38.11	24.01
Zm00001d029979_P001	Maize	plastid	37.41	23.57
GSMUA_Achr7P18850_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	49.3	19.94
CDX79226	Canola	cytosol	9.09	15.95
Zm00001d045910_P001	Maize	cytosol	4.2	7.89
Zm00001d029209_P003	Maize	cytosol	16.78	6.5
Zm00001d007082_P001	Maize	cytosol	17.48	6.46
Zm00001d022391_P001	Maize	cytosol	16.78	6.06
Zm00001d033670_P001	Maize	cytosol	14.69	6.03
Zm00001d013469_P002	Maize	cytosol	14.69	5.79
Zm00001d004955_P001	Maize	mitochondrion, plastid	17.13	5.56
Zm00001d013920_P002	Maize	nucleus	15.73	5.47
Zm00001d032539_P001	Maize	nucleus	15.73	5.47
Zm00001d014911_P009	Maize	cytosol	15.38	5.43
Zm00001d033645_P001	Maize	cytosol	12.94	4.82
Zm00001d028512_P001	Maize	cytosol	1.05	0.55
Zm00001d029211_P003	Maize	mitochondrion	0.7	0.48
Zm00001d047457_P002	Maize	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.20.110.10	MapMan:35.2	UniProt:A0A1D6M6A6	ProteinID:AQK86612.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0032259	InterPro:MORN	PFAM:PF02493	PANTHER:PTHR23084	PANTHER:PTHR23084:SF180
SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix	UniParc:UPI00022074DA	EnsemblPlantsGene:Zm00001d038430	EnsemblPlants:Zm00001d038430_P001
EnsemblPlants:Zm00001d038430_T001	SEG:seg	:	:	:	:

Description

Histone H3 K4-specific methyltransferase SET7/9 family protein

Coordinates

chr6:+:157121611..157122471

Molecular Weight (calculated)

30470.7 Da

IEP (calculated)

8.893

GRAVY (calculated)

-0.503

Length

286 amino acids

Sequence
(BLAST)

001: MDGHGGGAGK LTRTPSSLLR SPTMRAGPGT ASFHALDDPE PDDKKAQAPL GKPRALLRRA HHRFCPGPAQ SALLLLLPVL ALAALLMRGG DGGHHLALLA
101: AAAGFALAAA AAVARLRGAC PPSPALEASV RWFIGEDDDE EQRDWKRRAG LGLGLGLGRR AEVREGVEFY SNGDRYEGEF HGGRCSGSGV YSFFGKGKYE
201: GDWVDGKYDG HDVESWARGS RYRGQYRQGL RHGHGVYRFY SGDGYAGEWA GGQSHGIGAQ TCSDGSTYAG EFKGGVKHGL GCYHFR

Best Arabidopsis Sequence Match ( AT1G21920.1 )
(BLAST)

001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS

Arabidopsis Description

Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.