Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, golgi, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44523 | Canola | plastid | 83.64 | 80.1 |
| CDY38331 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 85.97 | 79.76 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 81.82 | 74.82 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 68.83 | 66.75 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 68.57 | 66.5 |
| CDY38830 | Canola | plastid | 68.31 | 66.25 |
| CDX96565 | Canola | plastid | 68.05 | 66.0 |
| CDX79226 | Canola | cytosol | 27.79 | 65.64 |
| CDY04690 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 71.17 | 64.17 |
| CDY30636 | Canola | mitochondrion | 70.91 | 63.93 |
| VIT_18s0001g03290.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane, plastid | 63.38 | 57.96 |
| Os08t0469700-01 | Rice | cytosol | 41.56 | 57.35 |
| KRH26231 | Soybean | plastid | 23.9 | 53.8 |
| GSMUA_Achr3P07060_001 | Banana | mitochondrion | 48.57 | 53.58 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 58.18 | 53.46 |
| GSMUA_Achr8P23250_001 | Banana | mitochondrion | 49.35 | 53.37 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 58.96 | 53.16 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 58.96 | 53.04 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 57.14 | 52.26 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 57.14 | 51.16 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 56.62 | 50.23 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 45.45 | 49.86 |
| KRH16298 | Soybean | plastid | 58.7 | 49.67 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 44.16 | 49.42 |
| TraesCS5A01G236200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 51.69 | 49.01 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 51.69 | 49.01 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 51.43 | 48.77 |
| TraesCS5B01G234500.1 | Wheat | cytosol, golgi, plasma membrane | 51.69 | 48.54 |
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 51.43 | 47.94 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 51.95 | 47.85 |
| Zm00001d031777_P001 | Maize | cytosol, golgi, plasma membrane | 49.61 | 47.39 |
| KXG35752 | Sorghum | plastid | 51.43 | 46.92 |
| OQU80624 | Sorghum | cytosol, golgi, plasma membrane | 50.39 | 46.52 |
| Zm00001d050008_P001 | Maize | cytosol, golgi, plasma membrane | 48.31 | 44.71 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 17.14 | 42.86 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 43.9 | 40.72 |
| Zm00001d038430_P001 | Maize | cytosol, golgi, plasma membrane | 28.57 | 38.46 |
| CDX76579 | Canola | cytosol, endoplasmic reticulum, golgi | 42.34 | 36.55 |
| CDY43465 | Canola | cytosol | 43.12 | 33.6 |
| CDY35600 | Canola | cytosol | 42.86 | 33.27 |
| CDY67767 | Canola | cytosol | 42.86 | 32.8 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 49.35 | 26.87 |
| CDY47390 | Canola | cytosol | 13.77 | 21.81 |
| CDX74021 | Canola | nucleus | 14.03 | 18.62 |
| CDY07965 | Canola | nucleus | 14.03 | 18.62 |
| CDX72088 | Canola | cytosol | 15.84 | 17.94 |
| CDX76021 | Canola | cytosol | 13.77 | 16.16 |
| CDX96562 | Canola | cytosol | 21.82 | 11.44 |
| CDY35423 | Canola | cytosol | 22.34 | 11.3 |
| CDY22511 | Canola | cytosol | 22.34 | 11.3 |
| CDX79949 | Canola | cytosol | 22.08 | 11.0 |
| CDY23866 | Canola | cytosol | 22.08 | 11.0 |
| CDY22147 | Canola | cytosol | 20.0 | 10.78 |
| CDX97920 | Canola | cytosol | 20.78 | 10.54 |
| CDY14647 | Canola | cytosol | 20.0 | 10.45 |
| CDY38833 | Canola | cytosol | 19.48 | 10.45 |
| CDY64062 | Canola | cytosol | 20.0 | 10.41 |
| CDY19330 | Canola | cytosol | 20.78 | 10.4 |
| CDY11484 | Canola | cytosol | 19.74 | 10.38 |
| CDY12865 | Canola | cytosol | 20.78 | 10.27 |
| CDY27172 | Canola | cytosol | 20.78 | 10.24 |
| CDY40487 | Canola | cytosol | 20.78 | 10.08 |
| CDY54607 | Canola | nucleus | 20.0 | 9.44 |
| CDY41570 | Canola | nucleus | 20.0 | 9.41 |
| CDY47393 | Canola | cytosol | 2.08 | 7.77 |
| CDY34670 | Canola | cytosol | 13.51 | 7.66 |
| CDY34857 | Canola | cytosol | 13.25 | 7.51 |
| CDX74020 | Canola | mitochondrion | 5.97 | 5.96 |
| CDX76709 | Canola | cytosol | 19.22 | 5.83 |
| CDY07964 | Canola | mitochondrion | 5.71 | 5.79 |
| CDX72087 | Canola | cytosol | 5.71 | 5.68 |
| CDY47391 | Canola | mitochondrion | 4.94 | 5.52 |
| CDX67667 | Canola | mitochondrion | 5.71 | 5.37 |
| CDY59828 | Canola | mitochondrion | 5.71 | 5.37 |
| CDX76024 | Canola | cytosol | 2.08 | 4.52 |
| CDX76022 | Canola | cytosol, mitochondrion | 2.86 | 4.14 |
| CDY52812 | Canola | cytosol | 3.9 | 3.54 |
| CDX90034 | Canola | cytosol | 3.64 | 3.29 |
| CDY15175 | Canola | cytosol | 3.64 | 3.29 |
| CDY11485 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88382 | EnsemblPlantsGene:GSBRNA2T00147908001 | Gene3D:2.20.110.10 | GO:A0A078DHD2 | InterPro:MORN | PANTHER:PTHR23084 |
| PANTHER:PTHR23084:SF176 | PFAM:PF02493 | ProteinID:CDX88382 | ProteinID:CDX88382.1 | SEG:seg | SMART:SM00698 |
| SUPFAM:SSF82185 | TMHMM:TMhelix | UniParc:UPI0004EE117C | MapMan:35.1 | : | : |
Description
BnaC06g38260D
Coordinates
chrLK031855:-:664593..665972
Molecular Weight (calculated)
42980.2 Da
IEP (calculated)
9.528
GRAVY (calculated)
-0.633
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYTKLKRTQ SSLLRSSPTI HSLSSISECD VSDLEAGEKE EKQSRRKQSK PFGLINRTGS NRIKPGLVFT LSSFLLFFFV FSQTGTSENL LLCLAFVAVA
101: LFLASRNMAV INQTVTAIKQ KHKPEPVQWY IGDSNQEPSN GDVYEGEFNG GRRCNGSGVY YYYVNGRYEG DWVNGRHDGY GIESWSKGSK FKGQYKQGLR
201: HGYGVYWFYT GDSYSGEWFN GQSHGSGVQT CADGSSYVGE FKFGVKHGLG SYQFRNGDRY AGEYYGDKIH GFGVYHFANG QYYEGAWHEG RKQGYGTYGF
301: RTGGVKCGEW DDGNLVNRHP LETGPVYKAV QSAREMARKG VNQRRVDEQV MRAVAAANKA ATAARVAAVK AVQNQMDGKF CEKLK
101: LFLASRNMAV INQTVTAIKQ KHKPEPVQWY IGDSNQEPSN GDVYEGEFNG GRRCNGSGVY YYYVNGRYEG DWVNGRHDGY GIESWSKGSK FKGQYKQGLR
201: HGYGVYWFYT GDSYSGEWFN GQSHGSGVQT CADGSSYVGE FKFGVKHGLG SYQFRNGDRY AGEYYGDKIH GFGVYHFANG QYYEGAWHEG RKQGYGTYGF
301: RTGGVKCGEW DDGNLVNRHP LETGPVYKAV QSAREMARKG VNQRRVDEQV MRAVAAANKA ATAARVAAVK AVQNQMDGKF CEKLK
001: MSQKKLTRTQ SSLLRSSPTI RSSIQSLSSI TECDDFNETS HHRREQDLEA GEKEEKQRRR KPVKSFGSMN RIKPGLAFTL ACLSFLSLSS FLLFFVDEIF
101: TSENLLLGLI FVALALFFAS RNMAVINQTV IAIKQIRVRS RIKHKPKPVQ WYIGDSKPEP IKEEETRLVV KEGVQFFSNG DFYEGEFNRG KCNGSGVYYY
201: YVNGRYEGDW INGRYDGYGI ECWSKGSKYK GQYKQGLRHG FGVYWFYTGD SYSGEWFNGQ SHGFGVQTCA DGSSFVGEFK FGVKHGLGSY HFRNGDKYAG
301: EYFGDKIHGF GVYHFANGHY YEGAWHEGRK QGYGTYRFRT GDIKSGEWDD GNLVNHLPLD SDPVRRAVQS ARERAKNGVN QRRIDEQVIR AVAAANKAAT
401: AARVAAVKAV QNQMDGKICD N
101: TSENLLLGLI FVALALFFAS RNMAVINQTV IAIKQIRVRS RIKHKPKPVQ WYIGDSKPEP IKEEETRLVV KEGVQFFSNG DFYEGEFNRG KCNGSGVYYY
201: YVNGRYEGDW INGRYDGYGI ECWSKGSKYK GQYKQGLRHG FGVYWFYTGD SYSGEWFNGQ SHGFGVQTCA DGSSFVGEFK FGVKHGLGSY HFRNGDKYAG
301: EYFGDKIHGF GVYHFANGHY YEGAWHEGRK QGYGTYRFRT GDIKSGEWDD GNLVNHLPLD SDPVRRAVQS ARERAKNGVN QRRIDEQVIR AVAAANKAAT
401: AARVAAVKAV QNQMDGKICD N
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9CAP2]
SUBAcon: [plastid,cytosol,plasma membrane,mitochondrion]
SUBAcon: [plastid,cytosol,plasma membrane,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.