Subcellular Localization
min:
: max
Winner_takes_all: cytosol, endoplasmic reticulum, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 2
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 99.01 | 97.34 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 89.41 | 86.84 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 85.71 | 85.71 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 85.47 | 85.47 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 32.27 | 85.06 |
| KXG35752 | Sorghum | plastid | 88.18 | 84.83 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 81.28 | 79.52 |
| KRH26231 | Soybean | plastid | 25.62 | 60.82 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 52.46 | 60.68 |
| VIT_18s0001g03290.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane, plastid | 61.58 | 59.38 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 49.75 | 58.72 |
| CDX96565 | Canola | plastid | 54.93 | 56.17 |
| CDY38830 | Canola | plastid | 54.93 | 56.17 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 59.11 | 56.07 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 54.68 | 55.92 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 54.68 | 55.92 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 57.39 | 55.61 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 58.37 | 55.5 |
| AT1G21920.1 | Thale cress | golgi, mitochondrion, peroxisome, plastid | 55.42 | 53.96 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 57.14 | 53.95 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 55.91 | 53.92 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 57.14 | 53.46 |
| CDY30636 | Canola | mitochondrion | 56.16 | 53.4 |
| Bra031352.1-P | Field mustard | golgi, mitochondrion, peroxisome, plasma membrane | 56.16 | 53.4 |
| CDY04690 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 55.91 | 53.16 |
| Bra016399.1-P | Field mustard | cytosol, golgi, mitochondrion, nucleus | 55.17 | 52.83 |
| Bra012299.1-P | Field mustard | mitochondrion | 54.19 | 52.51 |
| CDX88382 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 49.01 | 51.69 |
| CDY44523 | Canola | plastid | 50.25 | 50.75 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 52.46 | 50.59 |
| CDX79226 | Canola | cytosol | 20.2 | 50.31 |
| KRH16298 | Soybean | plastid | 56.16 | 50.11 |
| Bra008321.1-P | Field mustard | mitochondrion | 50.25 | 49.16 |
| CDY38331 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 50.25 | 49.16 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 58.87 | 33.8 |
| TraesCS4A01G271600.1 | Wheat | cytosol | 20.44 | 11.4 |
| TraesCS2A01G130800.1 | Wheat | cytosol | 21.92 | 11.38 |
| TraesCS4A01G143600.1 | Wheat | cytosol | 20.69 | 11.28 |
| TraesCS5A01G132500.1 | Wheat | plastid | 20.94 | 10.8 |
| TraesCS4A01G185600.1 | Wheat | plastid | 21.43 | 10.74 |
| TraesCS6A01G406600.3 | Wheat | nucleus | 20.69 | 10.32 |
| TraesCS2A01G479000.1 | Wheat | plastid | 19.21 | 9.71 |
| TraesCS4A01G274200.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 18.72 | 9.46 |
| TraesCS7A01G569400.1 | Wheat | plastid | 19.7 | 9.32 |
| TraesCS4A01G165400.2 | Wheat | cytosol | 6.16 | 6.08 |
| TraesCS5A01G002500.1 | Wheat | cytosol | 7.88 | 6.06 |
| TraesCS4A01G087500.1 | Wheat | cytosol | 7.88 | 6.05 |
| TraesCS7A01G569800.3 | Wheat | cytosol | 5.67 | 4.61 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G236200.1 | EnsemblPlantsGene:TraesCS5A01G236200 | Gene3D:2.20.110.10 | InterPro:MORN | PANTHER:PTHR23084 | PANTHER:PTHR23084:SF176 |
| PFAM:PF02493 | SEG:seg | SMART:SM00698 | SUPFAM:SSF82185 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr5A:-:451741156..451742698
Molecular Weight (calculated)
44348.2 Da
IEP (calculated)
9.414
GRAVY (calculated)
-0.549
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGIGGAGKL TRTPSSLLRS PTVRNCASFQ AVLVEDPEPD DKKSQAPAQG KALHPHGLRP GGPPHPALIL ALPLALLLLL LLLRDDRHLL LLAAAATAAL
101: AAAAAAARLL RGRLRMRRSP QSGSVQWFIG DEDDRPHHAR DTKGRAAAHG RVVREGVEFY SNGDCYEGEF HKGRCNGSGV YNFFGKGKYE GDWVDGKYDG
201: YGIESWARGS RYRGQYRQGL RHGHGVYRFY SGDCYAGEWA GGQSHGIGAQ TCSDGSSYVG EFKCGVKHGL GSYHFRNGDR YAGEYFGDKI HGFGVYRFAN
301: GHCYEGSWHE GKKQGFGMYT FRNGDKRSGE WDFGTLKSPL PPTDPSVERA VQAAQRAAEN AFHLPRVDEQ VHKVVMAANR AATAARVAAI KAVQNRMDGK
401: FCDTYV
101: AAAAAAARLL RGRLRMRRSP QSGSVQWFIG DEDDRPHHAR DTKGRAAAHG RVVREGVEFY SNGDCYEGEF HKGRCNGSGV YNFFGKGKYE GDWVDGKYDG
201: YGIESWARGS RYRGQYRQGL RHGHGVYRFY SGDCYAGEWA GGQSHGIGAQ TCSDGSSYVG EFKCGVKHGL GSYHFRNGDR YAGEYFGDKI HGFGVYRFAN
301: GHCYEGSWHE GKKQGFGMYT FRNGDKRSGE WDFGTLKSPL PPTDPSVERA VQAAQRAAEN AFHLPRVDEQ VHKVVMAANR AATAARVAAI KAVQNRMDGK
401: FCDTYV
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [golgi,plastid,peroxisome,mitochondrion]
SUBAcon: [golgi,plastid,peroxisome,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.