Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031352.1-P | Field mustard | golgi, mitochondrion, peroxisome, plasma membrane | 96.96 | 96.96 |
| CDY30636 | Canola | mitochondrion | 96.96 | 96.96 |
| CDY38830 | Canola | plastid | 84.54 | 90.93 |
| CDX96565 | Canola | plastid | 84.54 | 90.93 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 84.31 | 90.68 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 83.61 | 89.92 |
| AT1G21920.1 | Thale cress | golgi, mitochondrion, peroxisome, plastid | 85.71 | 87.77 |
| CDX88382 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 64.17 | 71.17 |
| CDY44523 | Canola | plastid | 66.28 | 70.4 |
| CDY38331 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 68.15 | 70.12 |
| Os08t0469700-01 | Rice | cytosol | 42.39 | 64.87 |
| VIT_18s0001g03290.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane, plastid | 63.7 | 64.61 |
| KRH26231 | Soybean | plastid | 24.36 | 60.82 |
| GSMUA_Achr3P07060_001 | Banana | mitochondrion | 49.18 | 60.17 |
| GSMUA_Achr8P23250_001 | Banana | mitochondrion | 49.18 | 58.99 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 58.78 | 58.78 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 58.31 | 58.18 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 56.67 | 57.76 |
| CDX79226 | Canola | cytosol | 22.01 | 57.67 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 56.21 | 57.01 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 56.91 | 56.51 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 57.38 | 56.45 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 53.63 | 56.4 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 45.43 | 56.4 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 53.4 | 56.16 |
| TraesCS5A01G236200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 53.16 | 55.91 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 45.9 | 55.84 |
| TraesCS5B01G234500.1 | Wheat | cytosol, golgi, plasma membrane | 53.16 | 55.37 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 54.1 | 55.26 |
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 53.4 | 55.21 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 19.67 | 54.55 |
| KXG35752 | Sorghum | plastid | 53.4 | 54.03 |
| Zm00001d031777_P001 | Maize | cytosol, golgi, plasma membrane | 50.12 | 53.1 |
| KRH16298 | Soybean | plastid | 56.44 | 52.97 |
| OQU80624 | Sorghum | cytosol, golgi, plasma membrane | 51.05 | 52.28 |
| Zm00001d050008_P001 | Maize | cytosol, golgi, plasma membrane | 49.88 | 51.2 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 45.67 | 46.99 |
| Zm00001d038430_P001 | Maize | cytosol, golgi, plasma membrane | 29.98 | 44.76 |
| CDX76579 | Canola | cytosol, endoplasmic reticulum, golgi | 41.69 | 39.91 |
| CDY43465 | Canola | cytosol | 42.62 | 36.84 |
| CDY35600 | Canola | cytosol | 42.62 | 36.69 |
| CDY67767 | Canola | cytosol | 42.62 | 36.18 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 49.88 | 30.13 |
| CDY47390 | Canola | cytosol | 12.65 | 22.22 |
| CDY07965 | Canola | nucleus | 12.88 | 18.97 |
| CDX74021 | Canola | nucleus | 12.88 | 18.97 |
| CDX72088 | Canola | cytosol | 14.29 | 17.94 |
| CDX76021 | Canola | cytosol | 12.65 | 16.46 |
| CDX96562 | Canola | cytosol | 20.14 | 11.72 |
| CDY35423 | Canola | cytosol | 20.61 | 11.56 |
| CDY22511 | Canola | cytosol | 20.61 | 11.56 |
| CDY23866 | Canola | cytosol | 20.37 | 11.25 |
| CDX79949 | Canola | cytosol | 20.37 | 11.25 |
| CDY14647 | Canola | cytosol | 18.97 | 10.99 |
| CDY64062 | Canola | cytosol | 18.97 | 10.95 |
| CDX97920 | Canola | cytosol | 19.2 | 10.8 |
| CDY22147 | Canola | cytosol | 18.03 | 10.78 |
| CDY38833 | Canola | cytosol | 18.03 | 10.72 |
| CDY19330 | Canola | cytosol | 19.2 | 10.66 |
| CDY27172 | Canola | cytosol | 18.97 | 10.37 |
| CDY12865 | Canola | cytosol | 18.74 | 10.27 |
| CDY11484 | Canola | cytosol | 17.56 | 10.25 |
| CDY40487 | Canola | cytosol | 18.97 | 10.2 |
| CDY54607 | Canola | nucleus | 18.97 | 9.93 |
| CDY41570 | Canola | nucleus | 18.97 | 9.9 |
| CDY47393 | Canola | cytosol | 1.87 | 7.77 |
| CDY34670 | Canola | cytosol | 11.71 | 7.36 |
| CDY34857 | Canola | cytosol | 11.48 | 7.22 |
| CDX76709 | Canola | cytosol | 17.33 | 5.83 |
| CDY47391 | Canola | mitochondrion | 4.68 | 5.81 |
| CDX74020 | Canola | mitochondrion | 5.15 | 5.7 |
| CDX72087 | Canola | cytosol | 5.15 | 5.68 |
| CDY07964 | Canola | mitochondrion | 4.92 | 5.53 |
| CDY59828 | Canola | mitochondrion | 5.15 | 5.37 |
| CDX67667 | Canola | mitochondrion | 5.15 | 5.37 |
| CDX76024 | Canola | cytosol | 1.87 | 4.52 |
| CDX76022 | Canola | cytosol, mitochondrion | 2.81 | 4.51 |
| CDY52812 | Canola | cytosol | 3.98 | 4.01 |
| CDY15175 | Canola | cytosol | 3.51 | 3.53 |
| CDX90034 | Canola | cytosol | 3.51 | 3.53 |
| CDY11485 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY04690 | EnsemblPlantsGene:GSBRNA2T00119312001 | Gene3D:2.20.110.10 | GO:A0A078ES12 | InterPro:MORN | PANTHER:PTHR23084 |
| PANTHER:PTHR23084:SF176 | PFAM:PF02493 | ProteinID:CDY04690 | ProteinID:CDY04690.1 | SEG:seg | SMART:SM00698 |
| SUPFAM:SSF82185 | TMHMM:TMhelix | UniParc:UPI0004EEAB80 | MapMan:35.1 | : | : |
Description
BnaC05g17280D
Coordinates
chrLK031956:-:957168..958528
Molecular Weight (calculated)
47666.7 Da
IEP (calculated)
9.830
GRAVY (calculated)
-0.606
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGQAKLTRT QSSLLRSSST VRSSFLSLNG DFSEVTHQKH DLEAGEKEEK QRRKPPKPFG SSPRTGLNRI NPGLAFTMVS LSFLSLSSFF FFVVFSQTEE
101: LLTSENLLLA LIFVAVALFF ASKNIARLNR TVLAVKQICD ETTRSLGFQS KNRSKPVQWY IGDSDTKPEK KTKRLVKEGV QFYSNGDFYE GEFHKGKCNG
201: SGVYYYFARG RYEGDWVDGR YDGHGIESWA RGSRYKGQYR QGLRHGYGVY RFYTGDCYTG EWLNGQSHGF GVQSCADGSS YVGESRFGVK HGLGSYHFRN
301: GDCYAGEYFG DKIHGFGVYR FANGHCYEGA WHEGRKQGYG AYSFRSGDAK SGEWDSGSLV TSLHPTSEPV RRAVQAARET AKKAVNRRRV DEQVSRAVAA
401: ANKAATAARV AAVKAVQNQM DGKFCQS
101: LLTSENLLLA LIFVAVALFF ASKNIARLNR TVLAVKQICD ETTRSLGFQS KNRSKPVQWY IGDSDTKPEK KTKRLVKEGV QFYSNGDFYE GEFHKGKCNG
201: SGVYYYFARG RYEGDWVDGR YDGHGIESWA RGSRYKGQYR QGLRHGYGVY RFYTGDCYTG EWLNGQSHGF GVQSCADGSS YVGESRFGVK HGLGSYHFRN
301: GDCYAGEYFG DKIHGFGVYR FANGHCYEGA WHEGRKQGYG AYSFRSGDAK SGEWDSGSLV TSLHPTSEPV RRAVQAARET AKKAVNRRRV DEQVSRAVAA
401: ANKAATAARV AAVKAVQNQM DGKFCQS
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.