Factsheet for TraesCS5D01G243200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plastid, cytosol

Predictor Summary:

plastid 2
golgi 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, golgi, plastid
Any Predictor:	cytosol, endoplasmic reticulum, golgi, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G236200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	97.34	99.01
TraesCS5B01G234500.1	Wheat	cytosol, golgi, plasma membrane	96.61	97.32
Os09t0453900-01	Rice	cytosol, golgi, plasma membrane	88.38	87.32
Zm00001d020697_P001	Maize	cytosol, golgi, plasma membrane, plastid	84.99	86.45
Zm00001d005849_P001	Maize	cytosol, golgi, plasma membrane	84.99	86.45
KXG35752	Sorghum	plastid	87.65	85.78
TraesCS2B01G252100.1	Wheat	cytosol	31.23	83.77
HORVU5Hr1G067890.4	Barley	cytosol	80.63	80.24
KRH26231	Soybean	plastid	25.18	60.82
GSMUA_Achr1P21340_001	Banana	endoplasmic reticulum, golgi	51.57	60.68
VIT_18s0001g03290.t01	Wine grape	cytosol, golgi, mitochondrion, plasma membrane, plastid	60.53	59.38
GSMUA_Achr5P17600_001	Banana	endoplasmic reticulum, plasma membrane	49.15	59.01
CDX96565	Canola	plastid	54.0	56.17
CDY00407	Canola	cytosol, golgi, mitochondrion, plastid	54.0	56.17
CDY01306	Canola	cytosol, golgi, mitochondrion, plastid	54.0	56.17
CDY38830	Canola	plastid	54.0	56.17
Solyc11g013010.1.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	58.11	56.07
PGSC0003DMT400045267	Potato	cytosol, golgi, mitochondrion, plasma membrane	56.42	55.61
PGSC0003DMT400002402	Potato	cytosol, golgi, mitochondrion, nucleus	57.38	55.5
AT1G21920.1	Thale cress	golgi, mitochondrion, peroxisome, plastid	54.72	54.2
KRH53208	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	56.17	53.95
Solyc06g060410.2.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	54.96	53.92
CDY30636	Canola	mitochondrion	55.45	53.63
Bra031352.1-P	Field mustard	golgi, mitochondrion, peroxisome, plasma membrane	55.45	53.63
KRH64714	Soybean	cytosol, peroxisome, plasma membrane, plastid	56.17	53.46
CDY04690	Canola	golgi, mitochondrion, peroxisome, plasma membrane	55.21	53.4
Bra016399.1-P	Field mustard	cytosol, golgi, mitochondrion, nucleus	54.24	52.83
Bra012299.1-P	Field mustard	mitochondrion	53.51	52.74
CDX88382	Canola	cytosol, golgi, mitochondrion, plasma membrane	47.94	51.43
CDY44523	Canola	plastid	49.15	50.5
AT1G77660.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	51.33	50.36
CDX79226	Canola	cytosol	19.85	50.31
KRH16298	Soybean	plastid	54.96	49.89
CDY38331	Canola	cytosol, golgi, mitochondrion, plasma membrane	49.15	48.92
Bra008321.1-P	Field mustard	mitochondrion	49.15	48.92
GSMUA_Achr7P18850_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	57.63	33.66
TraesCS4D01G039700.2	Wheat	cytosol	20.1	11.4
TraesCS2D01G132600.1	Wheat	cytosol	21.55	11.37
TraesCS4D01G161800.2	Wheat	cytosol	20.34	11.29
TraesCS5D01G140700.1	Wheat	plastid	20.34	10.69
TraesCS6D01G390100.2	Wheat	nucleus	20.34	10.32
TraesCS4D01G128000.2	Wheat	mitochondrion	20.82	10.11
TraesCS2D01G546200.1	Wheat	plastid	20.1	10.04
TraesCS2D01G478300.1	Wheat	cytosol, plastid	19.37	9.99
TraesCS4D01G036500.4	Wheat	cytosol	18.4	9.93
TraesCS7D01G543200.2	Wheat	plastid	19.85	9.59
TraesCS7D01G542800.1	Wheat	plastid	18.4	8.91
TraesCS5D01G002700.1	Wheat	cytosol, mitochondrion, nucleus	8.72	6.68
TraesCS4D01G217200.2	Wheat	cytosol	7.99	6.2
TraesCS4D01G161900.1	Wheat	cytosol	5.33	5.74

Protein Annotations

EnsemblPlants:TraesCS5D01G243200.1	EnsemblPlantsGene:TraesCS5D01G243200	Gene3D:2.20.110.10	InterPro:MORN	PANTHER:PTHR23084	PANTHER:PTHR23084:SF176
PFAM:PF02493	SEG:seg	SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:351403824..351405410

Molecular Weight (calculated)

44937.7 Da

IEP (calculated)

9.414

GRAVY (calculated)

-0.561

Length

413 amino acids

Sequence
(BLAST)

001: MDGHGAGGSG IGGAGKLTRT PSSLLRSSTV RNCSSFQAVL VEDPEPDDKK SQAPAQGKAL HPHGLRPGGP PHPALILALP LALLLLLLLL RDDRHLLLLA
101: AAATAALAAA AAAARLLRGR LRMRRSPQSG SVQWFIGDED DRPHHARDTK SRTAAHGRVV REGVEFYSNG DCYEGEFHKG RCNGSGVYNF FGKGKYEGDW
201: VDGKYDGYGI ESWARGSRYR GQYRQGLRHG HGVYRFYSGD CYAGEWAGGQ SHGIGAQTCS DGSSYVGEFK CGVKHGLGSY HFRNGDRYAG EYFGDKIHGF
301: GVYRFANGHC YEGSWHEGKK QGFGMYTFRN GDKRSGEWDF GTLKSPLPPT DPSVERAVQA AQRAAENAFH LPRVDEQVHK VVMAANRAAT AARVAAIKAV
401: QNRMDGKFCD TYV

Best Arabidopsis Sequence Match ( AT1G21920.1 )
(BLAST)

001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS

Arabidopsis Description

Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.