Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- golgi 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os08t0469700-01 | Rice | cytosol | 48.22 | 72.76 |
| GSMUA_Achr8P23250_001 | Banana | mitochondrion | 61.28 | 72.47 |
| KRH26231 | Soybean | plastid | 29.22 | 71.93 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 71.73 | 70.56 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 69.6 | 69.93 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 70.55 | 69.56 |
| GSMUA_Achr3P07060_001 | Banana | mitochondrion | 57.48 | 69.34 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 69.12 | 69.12 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 69.6 | 68.14 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 69.12 | 67.05 |
| CDX96565 | Canola | plastid | 62.47 | 66.25 |
| CDY38830 | Canola | plastid | 62.47 | 66.25 |
| AT1G21920.1 | Thale cress | golgi, mitochondrion, peroxisome, plastid | 64.61 | 65.23 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 61.05 | 64.74 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 61.05 | 64.74 |
| Bra031352.1-P | Field mustard | golgi, mitochondrion, peroxisome, plasma membrane | 65.08 | 64.17 |
| Bra016399.1-P | Field mustard | cytosol, golgi, mitochondrion, nucleus | 64.61 | 64.15 |
| CDY30636 | Canola | mitochondrion | 64.85 | 63.93 |
| CDY44523 | Canola | plastid | 61.05 | 63.93 |
| CDY04690 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 64.61 | 63.7 |
| CDX88382 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 57.96 | 63.38 |
| Bra012299.1-P | Field mustard | mitochondrion | 62.95 | 63.25 |
| KRH16298 | Soybean | plastid | 67.46 | 62.42 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 62.0 | 62.0 |
| CDY38331 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 61.05 | 61.93 |
| Bra008321.1-P | Field mustard | mitochondrion | 61.05 | 61.93 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 59.62 | 61.82 |
| TraesCS5B01G234500.1 | Wheat | cytosol, golgi, plasma membrane | 60.09 | 61.71 |
| TraesCS5A01G236200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 59.38 | 61.58 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 59.14 | 61.33 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 60.33 | 60.77 |
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 59.38 | 60.53 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 50.12 | 60.11 |
| KXG35752 | Sorghum | plastid | 59.62 | 59.48 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 47.98 | 58.72 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 21.38 | 58.44 |
| OQU80624 | Sorghum | cytosol, golgi, plasma membrane | 57.24 | 57.79 |
| Zm00001d031777_P001 | Maize | cytosol, golgi, plasma membrane | 55.11 | 57.57 |
| Zm00001d050008_P001 | Maize | cytosol, golgi, plasma membrane | 55.34 | 56.01 |
| CDX79226 | Canola | cytosol | 20.67 | 53.37 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 49.88 | 50.6 |
| Zm00001d038430_P001 | Maize | cytosol, golgi, plasma membrane | 32.54 | 47.9 |
| VIT_15s0021g01010.t01 | Wine grape | cytosol | 49.64 | 42.31 |
| VIT_02s0012g00090.t01 | Wine grape | mitochondrion | 49.41 | 36.75 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 56.29 | 33.52 |
| VIT_13s0067g02840.t01 | Wine grape | cytosol | 21.62 | 11.56 |
| VIT_12s0034g01790.t01 | Wine grape | cytosol | 21.14 | 11.24 |
| VIT_18s0001g03820.t01 | Wine grape | cytosol | 21.38 | 10.75 |
| VIT_08s0007g05240.t01 | Wine grape | cytosol | 16.39 | 10.49 |
| VIT_08s0007g04700.t01 | Wine grape | cytosol | 20.67 | 10.38 |
| VIT_06s0009g00860.t01 | Wine grape | cytosol, endoplasmic reticulum | 3.8 | 8.04 |
Protein Annotations
| EntrezGene:100245359 | wikigene:100245359 | Gene3D:2.20.110.10 | MapMan:35.1 | ProteinID:CCB45502 | ProteinID:CCB45502.1 |
| UniProt:F6H0T3 | EMBL:FN595227 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100245359 |
| wikigene:LOC100245359 | InterPro:MORN | PFAM:PF02493 | PANTHER:PTHR23084 | PANTHER:PTHR23084:SF176 | SMART:SM00698 |
| SUPFAM:SSF82185 | TIGR:TC67014 | TMHMM:TMhelix | UniParc:UPI00015C7852 | ArrayExpress:VIT_18s0001g03290 | EnsemblPlantsGene:VIT_18s0001g03290 |
| EnsemblPlants:VIT_18s0001g03290.t01 | unigene:Vvi.8236 | RefSeq:XP_002284432 | RefSeq:XP_002284432.1 | RefSeq:XP_010664228.1 | SEG:seg |
Description
No Description!
Coordinates
chr18:-:3244469..3246948
Molecular Weight (calculated)
47304.5 Da
IEP (calculated)
9.286
GRAVY (calculated)
-0.518
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGQKSQAKL TRTQSSLLRS SPTIRSSIHS LSSINEDEMI ASQEEEKKPH RSGSTPRTGS HRFASVLAMA SLTFCTLSFL FFFFFFYLRR EEIPTSENLL
101: LALIFVAIAL FFAGKNKGFL HHTISILKHS WDCNVRKLGF SKSNAKPVQW FIGESTTNKV QKAKRIVREG VEFYSNGDFY EGEFHKGRCN GSGVYNYIVN
201: GRYEGDWIDG RYDGYGIESW ARGSRYRGQY RQGLRHGYGV YRFYTGDSYA GEWVNGQSHG IGVQTCSDGS CYVGEFKCGV KHGLGCYHFR NGDRYAGEYF
301: GDKIHGFGVY HFANGHCYEG SWHEGRKQGY GMYSFRNGDT RCGEWDSGTL KNPLPPLTDA VLRAVQAARR TAENAIHVPR VDEQVNKAVT AANRAATAAR
401: VAAVKAVQNR MDGKFCETTD V
101: LALIFVAIAL FFAGKNKGFL HHTISILKHS WDCNVRKLGF SKSNAKPVQW FIGESTTNKV QKAKRIVREG VEFYSNGDFY EGEFHKGRCN GSGVYNYIVN
201: GRYEGDWIDG RYDGYGIESW ARGSRYRGQY RQGLRHGYGV YRFYTGDSYA GEWVNGQSHG IGVQTCSDGS CYVGEFKCGV KHGLGCYHFR NGDRYAGEYF
301: GDKIHGFGVY HFANGHCYEG SWHEGRKQGY GMYSFRNGDT RCGEWDSGTL KNPLPPLTDA VLRAVQAARR TAENAIHVPR VDEQVNKAVT AANRAATAAR
401: VAAVKAVQNR MDGKFCETTD V
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.