Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44523 | Canola | plastid | 68.71 | 27.86 |
| CDX88382 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 65.64 | 27.79 |
| CDY38331 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 69.33 | 27.23 |
| Os08t0469700-01 | Rice | cytosol | 46.01 | 26.88 |
| AT1G77660.1 | Thale cress | cytosol, mitochondrion, plasma membrane, plastid | 64.42 | 24.94 |
| CDY38830 | Canola | plastid | 57.67 | 23.68 |
| CDX96565 | Canola | plastid | 57.67 | 23.68 |
| CDY01306 | Canola | cytosol, golgi, mitochondrion, plastid | 57.06 | 23.43 |
| CDY00407 | Canola | cytosol, golgi, mitochondrion, plastid | 56.44 | 23.17 |
| CDY04690 | Canola | golgi, mitochondrion, peroxisome, plasma membrane | 57.67 | 22.01 |
| GSMUA_Achr8P23250_001 | Banana | mitochondrion | 47.85 | 21.91 |
| CDY30636 | Canola | mitochondrion | 56.44 | 21.55 |
| GSMUA_Achr3P07060_001 | Banana | mitochondrion | 46.01 | 21.49 |
| VIT_18s0001g03290.t01 | Wine grape | cytosol, golgi, mitochondrion, plasma membrane, plastid | 53.37 | 20.67 |
| GSMUA_Achr5P17600_001 | Banana | endoplasmic reticulum, plasma membrane | 42.94 | 20.35 |
| TraesCS5A01G236200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 50.31 | 20.2 |
| TraesCS5B01G234500.1 | Wheat | cytosol, golgi, plasma membrane | 50.31 | 20.0 |
| Zm00001d020697_P001 | Maize | cytosol, golgi, plasma membrane, plastid | 49.69 | 19.95 |
| TraesCS5D01G243200.1 | Wheat | cytosol, endoplasmic reticulum, golgi, plastid | 50.31 | 19.85 |
| PGSC0003DMT400045267 | Potato | cytosol, golgi, mitochondrion, plasma membrane | 50.92 | 19.81 |
| Solyc06g060410.2.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 50.92 | 19.71 |
| Os09t0453900-01 | Rice | cytosol, golgi, plasma membrane | 50.31 | 19.62 |
| Zm00001d005849_P001 | Maize | cytosol, golgi, plasma membrane | 48.47 | 19.46 |
| Zm00001d031777_P001 | Maize | cytosol, golgi, plasma membrane | 47.85 | 19.35 |
| PGSC0003DMT400002402 | Potato | cytosol, golgi, mitochondrion, nucleus | 50.31 | 19.2 |
| Solyc11g013010.1.1 | Tomato | cytosol, golgi, mitochondrion, plasma membrane | 50.31 | 19.16 |
| GSMUA_Achr1P21340_001 | Banana | endoplasmic reticulum, golgi | 41.1 | 19.09 |
| KXG35752 | Sorghum | plastid | 49.08 | 18.96 |
| KRH53208 | Soybean | cytosol, mitochondrion, peroxisome, plasma membrane | 49.08 | 18.6 |
| HORVU5Hr1G067890.4 | Barley | cytosol | 46.63 | 18.31 |
| OQU80624 | Sorghum | cytosol, golgi, plasma membrane | 46.63 | 18.23 |
| KRH16298 | Soybean | plastid | 49.08 | 17.58 |
| Zm00001d050008_P001 | Maize | cytosol, golgi, plasma membrane | 44.79 | 17.55 |
| KRH64714 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 46.01 | 17.28 |
| CDX76579 | Canola | cytosol, endoplasmic reticulum, golgi | 43.56 | 15.92 |
| CDY43465 | Canola | cytosol | 43.56 | 14.37 |
| KRH26231 | Soybean | plastid | 14.72 | 14.04 |
| CDY35600 | Canola | cytosol | 42.33 | 13.91 |
| CDY67767 | Canola | cytosol | 41.72 | 13.52 |
| GSMUA_Achr7P18850_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 49.08 | 11.32 |
| Zm00001d038430_P001 | Maize | cytosol, golgi, plasma membrane | 15.95 | 9.09 |
| CDY47390 | Canola | cytosol | 12.27 | 8.23 |
| CDY07965 | Canola | nucleus | 12.88 | 7.24 |
| CDX74021 | Canola | nucleus | 12.88 | 7.24 |
| CDX72088 | Canola | cytosol | 12.88 | 6.18 |
| CDX76021 | Canola | cytosol | 12.27 | 6.1 |
| TraesCS2B01G252100.1 | Wheat | cytosol | 5.52 | 5.84 |
| CDY34670 | Canola | cytosol | 23.93 | 5.74 |
| CDY34857 | Canola | cytosol | 23.31 | 5.6 |
| CDY12865 | Canola | cytosol | 25.15 | 5.26 |
| CDY40487 | Canola | cytosol | 25.15 | 5.16 |
| CDY38833 | Canola | cytosol | 22.09 | 5.01 |
| CDX97920 | Canola | cytosol | 23.31 | 5.01 |
| CDY19330 | Canola | cytosol | 23.31 | 4.94 |
| CDX96562 | Canola | cytosol | 22.09 | 4.9 |
| CDY22511 | Canola | cytosol | 22.09 | 4.73 |
| CDY35423 | Canola | cytosol | 22.09 | 4.73 |
| CDY23866 | Canola | cytosol | 22.09 | 4.66 |
| CDX79949 | Canola | cytosol | 22.09 | 4.66 |
| CDY54607 | Canola | nucleus | 23.31 | 4.66 |
| CDY11484 | Canola | cytosol | 20.86 | 4.64 |
| CDY22147 | Canola | cytosol | 20.25 | 4.62 |
| CDY41570 | Canola | nucleus | 22.7 | 4.52 |
| CDY27172 | Canola | cytosol | 20.86 | 4.35 |
| CDY14647 | Canola | cytosol | 17.18 | 3.8 |
| CDY64062 | Canola | cytosol | 17.18 | 3.78 |
| CDX76022 | Canola | cytosol, mitochondrion | 4.91 | 3.01 |
| CDY07964 | Canola | mitochondrion | 6.75 | 2.89 |
| CDX74020 | Canola | mitochondrion | 6.75 | 2.85 |
| CDX72087 | Canola | cytosol | 6.75 | 2.84 |
| CDY59828 | Canola | mitochondrion | 6.75 | 2.68 |
| CDX67667 | Canola | mitochondrion | 6.75 | 2.68 |
| CDX76709 | Canola | cytosol | 20.25 | 2.6 |
| CDY47391 | Canola | mitochondrion | 4.91 | 2.33 |
| CDY52812 | Canola | cytosol | 4.91 | 1.89 |
| CDX90034 | Canola | cytosol | 4.29 | 1.65 |
| CDY15175 | Canola | cytosol | 4.29 | 1.65 |
| CDY11485 | Canola | cytosol | 0.0 | 0.0 |
| CDX76024 | Canola | cytosol | 0.0 | 0.0 |
| CDY47393 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX79226 | EnsemblPlantsGene:GSBRNA2T00131826001 | Gene3D:2.20.110.10 | InterPro:MORN | PANTHER:PTHR23084 | PANTHER:PTHR23084:SF176 |
| PFAM:PF02493 | ProteinID:CDX79226 | ProteinID:CDX79226.1 | SMART:SM00698 | SUPFAM:SSF82185 | UniParc:UPI0004EE08E3 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC06g20770D
Coordinates
chrLK031817:-:460535..461315
Molecular Weight (calculated)
18621.5 Da
IEP (calculated)
6.024
GRAVY (calculated)
-0.802
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISFLTEED ANAVEVEFTI ITLTEDTKEI GSIEDNHGFG VQTCADGSSY VRKFKFGLKH GLGSYHFRNG DKHAGEYFRD KIHGFGVYHF PNGHYYEGAW
101: HEGRKQRYGT YGFITGDTEC GEWDDGNRLS PETGLLRKAV QSAQEMARKG VDQRRVHEQW YGL
101: HEGRKQRYGT YGFITGDTEC GEWDDGNRLS PETGLLRKAV QSAQEMARKG VDQRRVHEQW YGL
001: MEKQAKLTRT QSSLLRSSSN LRSSYQSLSS IVEGEQDLEA GEKEEKQRRK PPKPFGSPNP KTGLTRINPG LAFTMVSLSF LSLSSFFFFV VFSQTDEILT
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
101: SENLLLALIF VAVALFFASK NISLLNQTVI AIKNLGFQNR DSKSKPVQWY IGDDSKPEKK VIKRFVKEGV QFYSNGDFYE GEFNKGKCNG SGVYYYFVRG
201: RYEGDWLDGR YDGHGIESWA RGSRYKGQYR QGLRHGFGVY RFYTGDCYAG EWFNGQSHGF GVQSCSDGSS YLGESRFGVK HGLGSYHFRN GDKYAGEYFG
301: DKIHGFGVYR FANGHCYEGA WHEGRKQGFG AYSFRNGDAK SGEWDSGVLV TSLPLTSEPV SRAVQAARET ANKAVNRRRV DEQVSRAVAA ANKAATAARV
401: AAVRAVQNQM DGKFCQS
Arabidopsis Description
Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SFE3]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
SUBAcon: [mitochondrion,peroxisome,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.