CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75587	Soybean	cytosol	94.03	93.82
KRH54848	Soybean	endoplasmic reticulum	27.88	85.71
KRH66442	Soybean	cytosol	24.34	82.71
KRH48871	Soybean	cytosol	23.45	79.7
HORVU4Hr1G082070.1	Barley	endoplasmic reticulum	54.65	64.49
PGSC0003DMT400034161	Potato	cytosol	67.26	63.07
Solyc10g061960.1.1	Tomato	cytosol	66.59	61.55
KRH04250	Soybean	cytosol	56.64	59.12
GSMUA_Achr2P10390_001	Banana	cytosol	62.39	59.0
EER94469	Sorghum	plastid	59.29	58.9
Zm00001d000053_P001	Maize	cytosol, plastid	59.07	58.81
Zm00001d029979_P001	Maize	plastid	58.85	58.59
Os10t0565000-01	Rice	cytosol, plastid	59.07	57.17
TraesCSU01G007200.1	Wheat	nucleus	57.3	55.7
GSMUA_Achr4P21670_001	Banana	cytosol	60.84	55.56
HORVU1Hr1G055220.1	Barley	cytosol	57.3	55.22
GSMUA_Achr4P26370_001	Banana	plastid	52.43	54.99
KRH26231	Soybean	plastid	20.8	54.97
KRH53208	Soybean	cytosol, mitochondrion, peroxisome, plasma membrane	42.04	44.19
KRH64714	Soybean	cytosol, peroxisome, plasma membrane, plastid	42.26	44.01
KRH57539	Soybean	cytosol	26.33	43.75
KRH16298	Soybean	plastid	41.81	41.54
KRH64735	Soybean	cytosol	19.03	12.25
KRH53182	Soybean	cytosol	19.25	12.13
KRH18809	Soybean	plastid	18.14	11.58
KRH16603	Soybean	plastid	17.92	11.49
KRH63941	Soybean	cytosol	17.48	11.3
KRH59671	Soybean	cytosol	17.7	11.24
KRH71714	Soybean	cytosol	19.25	11.23
KRH41004	Soybean	cytosol, plastid	17.7	11.13
KRH43052	Soybean	cytosol	19.03	11.08
KRH59177	Soybean	cytosol	18.58	10.87
KRH13374	Soybean	cytosol	17.92	10.79
KRH53997	Soybean	cytosol	16.81	10.75
KRH30061	Soybean	cytosol	17.92	10.71
KRH20721	Soybean	cytosol	17.7	10.64
KRH10423	Soybean	cytosol	18.14	10.64
KRH44044	Soybean	cytosol	17.7	10.4
KRG95108	Soybean	cytosol	17.26	10.05
KRH66776	Soybean	cytosol	17.48	10.04
KRH67772	Soybean	cytosol	17.92	9.9
KRH19963	Soybean	cytosol	17.92	9.85
KRH32566	Soybean	cytosol	17.7	9.71
KRG99568	Soybean	cytosol	1.55	7.87
KRG94537	Soybean	endoplasmic reticulum, plastid, vacuole	1.77	5.06
KRG96049	Soybean	cytosol, mitochondrion	1.99	4.89
KRH04913	Soybean	cytosol	0.66	4.84
KRH15888	Soybean	cytosol	1.11	4.67

Protein Annotations

EMBL:ACUP02005348	EnsemblPlants:KRH46546	EnsemblPlantsGene:GLYMA_08G340800	EntrezGene:102667330	Gene3D:2.20.110.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:MORN	PANTHER:PTHR23084	PANTHER:PTHR23084:SF203	PFAM:PF02493
ProteinID:KRH46546	ProteinID:KRH46546.1	SEG:seg	SMART:SM00698	SUPFAM:SSF82185	TMHMM:TMhelix
UniParc:UPI00023CA518	UniProt:K7LAK2	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:45685735..45689914

Molecular Weight (calculated)

50442.4 Da

IEP (calculated)

10.093

GRAVY (calculated)

-0.486

Length

452 amino acids

Sequence
(BLAST)

001: MHQKKSEVQI GKESVGVSSD FNPQFQKHPY HRHQQFYPQI EIDISPQSPP QPTTPPPPPP PPSLSKQKHI FKPQNAAFFS VSVAAKSAAF RALRRVRRQR
101: ALLLLAVPFL YLYFLISRSF LLDLLSAIAF SAALVFSLNL AFPLPLRSVR LKAAKNSASR PAPALPVFWT IGSRPKTEKR AAASGCWVQV FGNGDVYEGE
201: FHRGKCSGSG VYYYSRSGRY EGDWVDGKYD GYGVETWARG SRYRGCYWQG LRHGFGVYRF YTGDVYAGEW SNGQSHGSGV HTCEDGSRYV GEFKWGVKHG
301: LGHYHFRNGD TYAGEYFADK MHGFGIYHFA NGHRYEGAWH EGRRQGLGMY TFRNGETQSG HWQNGVLDIP STRNTTSPVS PVGVYYSKVL NAVQEARRAA
401: EKAYDMAKVD EGVNRAVAAS NRAANAARVA AVKAVQKQNY HVSSESFSIP VV

Best Arabidopsis Sequence Match ( AT4G17080.1 )
(BLAST)

001: MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD
101: DFRRQQRASL GPISSYCPSY LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF VFSIIAFSFV LSISLKFALP
201: HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE
301: TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY
401: EGAWHEGRRQ GLGMYTFRNG ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA VMVANRAANA ARVAATKAVQ
501: TQTFHCSSGD DPL

Arabidopsis Description

AT4g17080/dl4570w [Source:UniProtKB/TrEMBL;Acc:Q8L7W4]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.