Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr9P14690_001 | Banana | nucleus | 44.57 | 50.0 |
GSMUA_Achr8P23510_001 | Banana | nucleus | 44.57 | 48.45 |
GSMUA_Achr5P05350_001 | Banana | nucleus | 43.43 | 46.34 |
Bra026523.1-P | Field mustard | nucleus | 21.71 | 42.7 |
EES07324 | Sorghum | nucleus | 41.14 | 42.6 |
Os02t0728001-00 | Rice | nucleus | 40.57 | 42.01 |
Zm00001d017911_P001 | Maize | nucleus | 40.57 | 40.34 |
Zm00001d051739_P001 | Maize | nucleus | 33.71 | 39.33 |
Os09t0474000-01 | Rice | nucleus | 36.0 | 36.42 |
Zm00001d052807_P001 | Maize | nucleus | 29.14 | 36.17 |
HORVU6Hr1G072490.1 | Barley | nucleus | 39.43 | 35.2 |
CDX81569 | Canola | nucleus | 24.0 | 35.0 |
VIT_14s0083g00700.t01 | Wine grape | nucleus | 39.43 | 34.85 |
VIT_01s0010g00930.t01 | Wine grape | nucleus | 38.29 | 34.36 |
CDX85297 | Canola | nucleus | 33.71 | 34.3 |
TraesCS6B01G318700.1 | Wheat | nucleus | 40.57 | 34.3 |
Solyc03g046440.1.1 | Tomato | nucleus | 33.71 | 34.1 |
PGSC0003DMT400003516 | Potato | nucleus | 34.86 | 33.89 |
Solyc02g089420.1.1 | Tomato | nucleus | 34.29 | 33.33 |
KRH45160 | Soybean | nucleus | 36.57 | 33.16 |
PGSC0003DMT400019465 | Potato | nucleus | 36.57 | 32.99 |
Solyc04g005170.1.1 | Tomato | nucleus | 36.0 | 32.98 |
AT3G30530.1 | Thale cress | nucleus | 32.57 | 32.95 |
Bra025418.1-P | Field mustard | nucleus | 32.0 | 32.56 |
CDY66911 | Canola | nucleus | 32.0 | 32.56 |
Bra038341.1-P | Field mustard | nucleus | 22.29 | 32.5 |
CDY45843 | Canola | nucleus | 22.29 | 32.5 |
EER96905 | Sorghum | nucleus | 34.29 | 32.26 |
HORVU2Hr1G098530.1 | Barley | nucleus | 32.57 | 32.2 |
PGSC0003DMT400004821 | Potato | nucleus | 35.43 | 31.96 |
AT1G68880.1 | Thale cress | nucleus | 25.14 | 31.88 |
HORVU1Hr1G013620.1 | Barley | nucleus | 33.14 | 31.87 |
KRH01443 | Soybean | nucleus | 35.43 | 31.79 |
TraesCS6D01G270000.1 | Wheat | nucleus | 36.0 | 31.66 |
HORVU5Hr1G070540.1 | Barley | nucleus | 34.29 | 31.25 |
KRH71054 | Soybean | nucleus | 35.43 | 31.16 |
Zm00001d005962_P001 | Maize | nucleus, plastid | 29.14 | 31.1 |
Bra020735.1-P | Field mustard | nucleus | 30.29 | 30.99 |
CDY35775 | Canola | nucleus | 30.29 | 30.99 |
AT5G38800.1 | Thale cress | nucleus | 29.14 | 30.91 |
KRH75199 | Soybean | nucleus | 34.86 | 30.81 |
TraesCS7A01G181100.1 | Wheat | nucleus | 37.71 | 30.41 |
Zm00001d020823_P001 | Maize | nucleus | 33.71 | 30.26 |
TraesCS5A01G250400.1 | Wheat | nucleus | 33.71 | 30.1 |
TraesCS6A01G288900.1 | Wheat | nucleus | 35.43 | 30.1 |
CDY16099 | Canola | nucleus | 28.0 | 30.06 |
TraesCS5B01G248400.1 | Wheat | nucleus | 33.14 | 30.05 |
TraesCS7B01G118500.1 | Wheat | nucleus | 31.43 | 29.89 |
TraesCS7A01G211500.1 | Wheat | nucleus | 31.43 | 29.73 |
Zm00001d031272_P001 | Maize | nucleus | 34.29 | 29.7 |
TraesCS7D01G213200.1 | Wheat | nucleus | 30.86 | 29.35 |
Bra023540.1-P | Field mustard | nucleus | 31.43 | 29.26 |
CDX85530 | Canola | nucleus | 31.43 | 29.26 |
TraesCS5D01G258000.1 | Wheat | nucleus | 32.0 | 29.02 |
CDY26467 | Canola | nucleus | 30.29 | 28.96 |
TraesCS7D01G182900.1 | Wheat | nucleus | 36.57 | 28.96 |
HORVU7Hr1G043080.1 | Barley | nucleus | 32.0 | 28.87 |
Bra025144.1-P | Field mustard | nucleus | 28.0 | 28.82 |
CDY48072 | Canola | nucleus | 28.0 | 28.82 |
CDY71548 | Canola | nucleus | 28.0 | 28.82 |
Zm00001d037360_P001 | Maize | nucleus | 32.57 | 28.79 |
KRG93749 | Soybean | nucleus | 36.0 | 28.64 |
AT5G15830.1 | Thale cress | nucleus | 30.29 | 28.49 |
KXG25724 | Sorghum | nucleus | 37.14 | 28.14 |
AT1G13600.1 | Thale cress | nucleus | 31.43 | 28.06 |
HORVU7Hr1G037230.2 | Barley | nucleus | 35.43 | 27.93 |
Bra029353.1-P | Field mustard | mitochondrion, nucleus | 16.57 | 27.88 |
Bra008670.1-P | Field mustard | nucleus | 29.14 | 27.87 |
CDX69495 | Canola | nucleus | 29.14 | 27.87 |
CDX90970 | Canola | nucleus | 30.86 | 27.84 |
AT2G04038.1 | Thale cress | nucleus | 26.29 | 27.71 |
KRH18312 | Soybean | nucleus | 33.71 | 27.57 |
CDX99780 | Canola | nucleus | 28.0 | 27.37 |
CDY46496 | Canola | nucleus | 28.0 | 27.37 |
Bra017359.1-P | Field mustard | nucleus | 26.86 | 27.01 |
Os08t0487100-01 | Rice | nucleus | 35.43 | 26.96 |
TraesCS7B01G086100.1 | Wheat | nucleus | 34.29 | 26.91 |
CDX70656 | Canola | nucleus | 29.14 | 26.84 |
CDY04169 | Canola | nucleus | 26.86 | 26.7 |
CDY33124 | Canola | nucleus | 26.86 | 26.7 |
KXG19789 | Sorghum | nucleus | 28.57 | 26.6 |
Bra006324.1-P | Field mustard | nucleus | 27.43 | 26.52 |
Bra026895.1-P | Field mustard | nucleus | 28.57 | 25.64 |
Bra026896.1-P | Field mustard | nucleus | 28.57 | 25.64 |
Bra019715.1-P | Field mustard | nucleus | 28.0 | 25.39 |
CDX78655 | Canola | nucleus | 28.0 | 25.39 |
CDX70639 | Canola | nucleus | 27.43 | 25.0 |
CDX98108 | Canola | nucleus | 28.0 | 24.75 |
CDY37559 | Canola | nucleus | 28.0 | 24.75 |
CDY45336 | Canola | nucleus | 28.0 | 24.75 |
AT5G08141.1 | Thale cress | nucleus | 18.29 | 23.36 |
CDY40812 | Canola | nucleus | 23.43 | 23.16 |
CDY42835 | Canola | nucleus | 23.43 | 23.16 |
Bra005971.1-P | Field mustard | nucleus | 21.14 | 23.12 |
CDY66792 | Canola | nucleus | 20.57 | 21.95 |
CDX78324 | Canola | nucleus | 21.14 | 21.76 |
KRH56749 | Soybean | nucleus | 26.29 | 21.5 |
KRH03190 | Soybean | cytosol, mitochondrion | 12.57 | 21.15 |
Bra013005.1-P | Field mustard | nucleus | 21.71 | 20.88 |
CDY51629 | Canola | nucleus | 22.29 | 20.63 |
KRH63157 | Soybean | nucleus | 19.43 | 20.36 |
CDY02193 | Canola | nucleus | 21.14 | 20.22 |
Bra035957.1-P | Field mustard | nucleus | 21.14 | 20.11 |
AT5G60830.1 | Thale cress | nucleus | 21.71 | 18.45 |
CDX87188 | Canola | nucleus | 21.71 | 17.43 |
CDX70638 | Canola | nucleus | 15.43 | 16.67 |
CDX70640 | Canola | nucleus | 14.86 | 16.35 |
CDY16837 | Canola | nucleus | 19.43 | 15.38 |
Protein Annotations
Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G36230_001 | EnsemblPlants:GSMUA_Achr6P36230_001 | EnsemblPlants:GSMUA_Achr6T36230_001 | InterPro:IPR004827 |
UniProt:M0TD66 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF363 |
SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002953A00 | InterPro:bZIP | : | : |
Description
bZIP transcription factor domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G36230_001]
Coordinates
chr6:+:34296558..34297085
Molecular Weight (calculated)
20525.4 Da
IEP (calculated)
9.469
GRAVY (calculated)
-0.815
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MHRGEIASIR YLSPSDLPSF QTDYHMAHGD VPSFYFGNIF GCYSSNQVQS MPLQELSLSN SGLNSHMVIV EAEEYQLNLA EERRKRRMIS NRESARRSRM
101: RKQNQLSELW SLVVHLRSTN QKLLDDLNRV IREHDQLLHE NAQLRDEETK LQNKLKNIQA EDKLCSAKSR RNLLR
101: RKQNQLSELW SLVVHLRSTN QKLLDDLNRV IREHDQLLHE NAQLRDEETK LQNKLKNIQA EDKLCSAKSR RNLLR
001: MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
Arabidopsis Description
ATBZIP42BZIP42 [Source:UniProtKB/TrEMBL;Acc:A0A178VMH2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.