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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra003500.1-P
Bra007679.1-P
Bra010035.1-P
Bra011545.1-P
Bra017359.1-P
Bra017664.1-P
Bra019715.1-P
Bra020735.1-P
Bra025144.1-P
Bra025418.1-P
Bra026523.1-P
Bra026895.1-P
Bra026896.1-P
Bra034639.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G13600.1 Bra019715.1-P AT1G13600.1 16709202
AT1G13600.1 Bra026895.1-P AT1G13600.1 16709202
AT1G13600.1 Bra026896.1-P AT1G13600.1 16709202
AT1G13600.1 Bra017359.1-P AT2G04038.1 16709202
AT1G13600.1 Bra025144.1-P AT2G04038.1 16709202
AT1G13600.1 Bra026523.1-P AT2G04038.1 16709202
AT1G13600.1 Bra020735.1-P AT3G30530.1 16709202
AT1G13600.1 Bra025418.1-P AT3G30530.1 16709202
AT1G13600.1 Bra003500.1-P AT3G62420.1 16709202
AT1G13600.1 Bra007679.1-P AT3G62420.1 16709202
AT1G13600.1 Bra011545.1-P AT4G34590.1 16709202
AT1G13600.1 Bra017664.1-P AT4G34590.1 16709202
AT1G13600.1 Bra034639.1-P AT4G34590.1 16709202
AT1G13600.1 Bra010035.1-P AT5G49450.1 16709202
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026895.1-P Field mustard nucleus 100.0 100.0
AT1G13600.1 Thale cress nucleus 84.62 84.18
Bra019715.1-P Field mustard nucleus 78.97 79.79
CDY16099 Canola nucleus 64.1 76.69
Bra026523.1-P Field mustard nucleus 29.74 65.17
Bra025144.1-P Field mustard nucleus 53.33 61.18
Bra017359.1-P Field mustard nucleus 52.82 59.2
Bra025418.1-P Field mustard nucleus 38.97 44.19
Bra020735.1-P Field mustard nucleus 37.95 43.27
Bra038341.1-P Field mustard nucleus 25.64 41.67
PGSC0003DMT400019465 Potato nucleus 40.0 40.21
Solyc04g005170.1.1 Tomato nucleus 38.97 39.79
VIT_01s0010g00930.t01 Wine grape nucleus 39.49 39.49
PGSC0003DMT400004821 Potato nucleus 37.95 38.14
KRH75199 Soybean nucleus 38.46 37.88
Zm00001d052807_P001 Maize nucleus 27.18 37.59
Bra006324.1-P Field mustard nucleus 34.36 37.02
KRH71054 Soybean nucleus 37.44 36.68
Bra029353.1-P Field mustard mitochondrion, nucleus 18.97 35.58
Bra008670.1-P Field mustard nucleus 33.33 35.52
Bra023540.1-P Field mustard nucleus 32.82 34.04
GSMUA_Achr9P14690_001 Banana nucleus 25.64 32.05
GSMUA_Achr5P05350_001 Banana nucleus 25.64 30.49
Bra013005.1-P Field mustard nucleus 27.69 29.67
Os02t0191600-00 Rice nucleus 30.26 29.65
GSMUA_Achr8P23510_001 Banana nucleus 24.1 29.19
Zm00001d015664_P001 Maize nucleus 25.13 29.17
Os02t0728001-00 Rice nucleus 25.13 28.99
GSMUA_Achr6P36230_001 Banana nucleus 25.64 28.57
TraesCS6D01G160200.1 Wheat nucleus 25.13 27.84
EES07324 Sorghum nucleus 24.1 27.81
TraesCS7B01G293900.1 Wheat nucleus 23.59 27.54
Zm00001d051739_P001 Maize nucleus 21.03 27.33
Os09t0474000-01 Rice nucleus 24.1 27.17
TraesCS6A01G170600.1 Wheat nucleus 24.62 27.12
EES06428 Sorghum nucleus 24.62 27.12
HORVU1Hr1G013620.1 Barley nucleus 25.13 26.92
Bra035957.1-P Field mustard nucleus 25.13 26.63
Zm00001d017911_P001 Maize nucleus 23.59 26.14
HORVU5Hr1G070540.1 Barley nucleus 25.64 26.04
TraesCS6B01G198700.1 Wheat nucleus 23.59 25.99
TraesCS7B01G293700.1 Wheat nucleus 22.05 25.75
Zm00001d005962_P001 Maize nucleus, plastid 21.54 25.61
TraesCS5A01G250400.1 Wheat nucleus 25.64 25.51
EER96905 Sorghum nucleus 24.1 25.27
TraesCS6D01G270000.1 Wheat nucleus 25.64 25.13
Zm00001d053703_P001 Maize nucleus 22.56 25.0
HORVU6Hr1G072490.1 Barley nucleus 25.13 25.0
Bra005971.1-P Field mustard nucleus 20.0 24.38
HORVU2Hr1G098530.1 Barley nucleus 22.05 24.29
Zm00001d031272_P001 Maize nucleus 25.13 24.26
Zm00001d020823_P001 Maize nucleus 24.1 24.1
TraesCS7D01G213200.1 Wheat nucleus 22.56 23.91
TraesCS5B01G248400.1 Wheat nucleus 23.59 23.83
TraesCS6A01G288900.1 Wheat nucleus 25.13 23.79
TraesCS7A01G181100.1 Wheat nucleus 26.15 23.5
TraesCS7B01G118500.1 Wheat nucleus 22.05 23.37
TraesCS7A01G211500.1 Wheat nucleus 22.05 23.24
TraesCS6B01G318700.1 Wheat nucleus 24.62 23.19
Zm00001d046664_P001 Maize nucleus 22.05 22.99
KXG19789 Sorghum nucleus 22.05 22.87
TraesCS5D01G258000.1 Wheat nucleus 22.56 22.8
HORVU7Hr1G043080.1 Barley nucleus 22.56 22.68
TraesCS7D01G182900.1 Wheat nucleus 25.64 22.62
KXG25724 Sorghum nucleus 26.15 22.08
HORVU6Hr1G034810.1 Barley nucleus 24.1 21.96
TraesCS7B01G086100.1 Wheat nucleus 24.62 21.52
KXG20422 Sorghum nucleus 21.54 21.21
HORVU7Hr1G037230.2 Barley nucleus 24.1 21.17
Os08t0487100-01 Rice nucleus 24.1 20.43
Zm00001d037360_P001 Maize nucleus 20.51 20.2
TraesCS7A01G391800.1 Wheat mitochondrion 21.03 16.94
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1EnsemblPlantsGene:Bra026896EnsemblPlants:Bra026896.1EnsemblPlants:Bra026896.1-Pncoils:Coil
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
UniProt:M4EDN5PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF133
SMART:SM00338SUPFAM:SSF57959UniParc:UPI0002542E9CInterPro:bZIPSEG:seg:
Description
AT1G13600 (E=4e-087) AtbZIP58 | AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58); DNA binding / protein heterodimerization/ protein homodimerization/ transcription factor
Coordinates
chrA09:+:34193805..34194392
Molecular Weight (calculated)
22660.0 Da
IEP (calculated)
5.355
GRAVY (calculated)
-1.126
Length
195 amino acids
Sequence
(BLAST)
001: MNTVPAELTG YFQYVAPGKY NNQTPIMESE YFNMHSSPTS SSYYINGLIN NNNFYSSSSN GQDLMTSNNS ASDEDHQQSM AIDERKQRRM VSNRESARRS
101: RMRKQRHLDE LWSQVIRLRT DNHCLIDKLN NVSESHELAL KENAKLKEET SDLRQLLSEI KSNNEDDNNF LRDLEDSISN TRSGSDQRGR DFELY
Best Arabidopsis Sequence Match ( AT1G13600.1 )
(BLAST)
001: MNTIPAELTG YFHYLPPDKY NNQTPIMESE YFNMPSSPTS CSSFYHLNGL INNNNYSSSS NGQDLMTSNN STSDEDHQQS MVIDERKQRR MISNRESARR
101: SRMRKQRHLD ELWSQVIRLR TDNHCLMDKL NRVSESHELA LKENAKLKEE TSDLRQLISE IKSHNEDDNS FLRELEDSIS NSRSDSNQSG RDFELC
Arabidopsis Description
AtbZIP58BZIP58 [Source:UniProtKB/TrEMBL;Acc:A0A178WP44]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.