Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G258000.1 | Wheat | nucleus | 78.76 | 78.76 |
| TraesCS5A01G250400.1 | Wheat | nucleus | 64.77 | 63.78 |
| HORVU5Hr1G070540.1 | Barley | nucleus | 60.62 | 60.94 |
| Os09t0474000-01 | Rice | nucleus | 48.7 | 54.34 |
| Zm00001d020823_P001 | Maize | nucleus | 49.22 | 48.72 |
| EER96905 | Sorghum | nucleus | 43.52 | 45.16 |
| Zm00001d005962_P001 | Maize | nucleus, plastid | 37.82 | 44.51 |
| Bra026523.1-P | Field mustard | nucleus | 19.17 | 41.57 |
| GSMUA_Achr9P14690_001 | Banana | nucleus | 32.64 | 40.38 |
| TraesCS7B01G086100.1 | Wheat | nucleus | 46.11 | 39.91 |
| GSMUA_Achr8P23510_001 | Banana | nucleus | 32.12 | 38.51 |
| TraesCS6B01G318700.1 | Wheat | nucleus | 38.86 | 36.23 |
| TraesCS7B01G118500.1 | Wheat | nucleus | 34.2 | 35.87 |
| CDY45843 | Canola | nucleus | 22.28 | 35.83 |
| Bra038341.1-P | Field mustard | nucleus | 22.28 | 35.83 |
| GSMUA_Achr5P05350_001 | Banana | nucleus | 30.05 | 35.37 |
| TraesCS7B01G293700.1 | Wheat | nucleus | 29.02 | 33.53 |
| TraesCS7B01G293900.1 | Wheat | nucleus | 29.02 | 33.53 |
| AT1G68880.1 | Thale cress | nucleus | 23.83 | 33.33 |
| CDX81569 | Canola | nucleus | 20.73 | 33.33 |
| GSMUA_Achr6P36230_001 | Banana | nucleus | 30.05 | 33.14 |
| Solyc02g089420.1.1 | Tomato | nucleus | 29.02 | 31.11 |
| PGSC0003DMT400003516 | Potato | nucleus | 28.5 | 30.56 |
| AT3G30530.1 | Thale cress | nucleus | 26.94 | 30.06 |
| TraesCS6B01G198700.1 | Wheat | nucleus | 27.46 | 29.94 |
| AT2G04038.1 | Thale cress | nucleus | 25.39 | 29.52 |
| Bra020735.1-P | Field mustard | nucleus | 25.91 | 29.24 |
| CDY35775 | Canola | nucleus | 25.91 | 29.24 |
| CDY66911 | Canola | nucleus | 25.91 | 29.07 |
| Solyc03g046440.1.1 | Tomato | nucleus | 25.91 | 28.9 |
| Bra025418.1-P | Field mustard | nucleus | 25.39 | 28.49 |
| CDY33124 | Canola | nucleus | 25.91 | 28.41 |
| CDY04169 | Canola | nucleus | 25.91 | 28.41 |
| VIT_01s0010g00930.t01 | Wine grape | nucleus | 28.5 | 28.21 |
| Bra017359.1-P | Field mustard | nucleus | 25.39 | 28.16 |
| CDY48072 | Canola | nucleus | 24.35 | 27.65 |
| Bra025144.1-P | Field mustard | nucleus | 24.35 | 27.65 |
| KRH71054 | Soybean | nucleus | 28.5 | 27.64 |
| Bra006324.1-P | Field mustard | nucleus | 25.91 | 27.62 |
| CDX99780 | Canola | nucleus | 25.39 | 27.37 |
| CDY46496 | Canola | nucleus | 25.39 | 27.37 |
| CDX85297 | Canola | nucleus | 24.35 | 27.33 |
| CDX69495 | Canola | nucleus | 25.91 | 27.32 |
| VIT_14s0083g00700.t01 | Wine grape | nucleus | 27.98 | 27.27 |
| KRH01443 | Soybean | nucleus | 27.46 | 27.18 |
| CDY71548 | Canola | nucleus | 23.83 | 27.06 |
| CDY16099 | Canola | nucleus | 22.8 | 26.99 |
| KRH45160 | Soybean | nucleus | 26.94 | 26.94 |
| PGSC0003DMT400019465 | Potato | nucleus | 26.94 | 26.8 |
| Bra008670.1-P | Field mustard | nucleus | 25.39 | 26.78 |
| AT5G38800.1 | Thale cress | nucleus | 22.8 | 26.67 |
| KRH75199 | Soybean | nucleus | 26.94 | 26.26 |
| CDY26467 | Canola | nucleus | 24.87 | 26.23 |
| CDX85530 | Canola | nucleus | 25.39 | 26.06 |
| Bra023540.1-P | Field mustard | nucleus | 25.39 | 26.06 |
| Bra029353.1-P | Field mustard | mitochondrion, nucleus | 13.99 | 25.96 |
| AT5G15830.1 | Thale cress | nucleus | 24.87 | 25.81 |
| CDX70656 | Canola | nucleus | 25.39 | 25.79 |
| KRH18312 | Soybean | nucleus | 28.5 | 25.7 |
| CDX78655 | Canola | nucleus | 25.39 | 25.39 |
| PGSC0003DMT400004821 | Potato | nucleus | 25.39 | 25.26 |
| CDX90970 | Canola | nucleus | 25.39 | 25.26 |
| Solyc04g005170.1.1 | Tomato | nucleus | 24.87 | 25.13 |
| CDX70639 | Canola | nucleus | 24.87 | 25.0 |
| AT1G13600.1 | Thale cress | nucleus | 24.35 | 23.98 |
| Bra026896.1-P | Field mustard | nucleus | 23.83 | 23.59 |
| Bra026895.1-P | Field mustard | nucleus | 23.83 | 23.59 |
| Bra019715.1-P | Field mustard | nucleus | 23.32 | 23.32 |
| KRG93749 | Soybean | nucleus | 26.42 | 23.18 |
| Bra005971.1-P | Field mustard | nucleus | 19.17 | 23.12 |
| CDY37559 | Canola | nucleus | 23.32 | 22.73 |
| CDY45336 | Canola | nucleus | 23.32 | 22.73 |
| CDX98108 | Canola | nucleus | 23.32 | 22.73 |
| CDY40812 | Canola | nucleus | 20.21 | 22.03 |
| Bra013005.1-P | Field mustard | nucleus | 20.21 | 21.43 |
| CDY42835 | Canola | nucleus | 19.17 | 20.9 |
| Bra035957.1-P | Field mustard | nucleus | 19.69 | 20.65 |
| AT5G60830.1 | Thale cress | nucleus | 21.76 | 20.39 |
| CDY02193 | Canola | nucleus | 18.65 | 19.67 |
| CDY51629 | Canola | nucleus | 18.65 | 19.05 |
| CDY66792 | Canola | nucleus | 16.06 | 18.9 |
| CDX78324 | Canola | nucleus | 16.58 | 18.82 |
| KRH56749 | Soybean | nucleus | 20.73 | 18.69 |
| AT5G08141.1 | Thale cress | nucleus | 12.95 | 18.25 |
| CDX87188 | Canola | nucleus | 20.21 | 17.89 |
| KRH03190 | Soybean | cytosol, mitochondrion | 9.33 | 17.31 |
| CDY16837 | Canola | nucleus | 19.17 | 16.74 |
| CDX70638 | Canola | nucleus | 12.95 | 15.43 |
| CDX70640 | Canola | nucleus | 12.44 | 15.09 |
| KRH63157 | Soybean | nucleus | 12.95 | 14.97 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF191 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5B01G248400 | EnsemblPlants:TraesCS5B01G248400.1 | InterPro:bZIP | TIGR:cd14702 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:430679645..430680432
Molecular Weight (calculated)
21612.3 Da
IEP (calculated)
7.419
GRAVY (calculated)
-0.884
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHHYHHGEV ASLHCLSPPN PPFHTHYHHP GMIAAGMTPP PPFHFSPAAY EYEDEPMLQE ALAAIGNNSP PGSGGAGDDI HGQVLASAAE EERRRRRMVS
101: NRESARRSRM RKQRQLSELW ARVAHLRGAN RRLLDELNRA MRSCGDVRRD NDRLSAEKAE LEARLEQLMQ QAQQSNNASS EPCEKNTTVA AAE
101: NRESARRSRM RKQRQLSELW ARVAHLRGAN RRLLDELNRA MRSCGDVRRD NDRLSAEKAE LEARLEQLMQ QAQQSNNASS EPCEKNTTVA AAE
001: MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
101: QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK QVISDMQIQS PFSCFRDDII PIE
Arabidopsis Description
ATBZIP42BZIP42 [Source:UniProtKB/TrEMBL;Acc:A0A178VMH2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.