Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G054510.1 | Barley | nucleus | 95.42 | 94.81 |
| TraesCS5D01G183500.1 | Wheat | nucleus | 94.12 | 93.51 |
| TraesCS5A01G179000.1 | Wheat | nucleus | 93.46 | 92.86 |
| Os09t0306400-01 | Rice | nucleus | 71.9 | 71.9 |
| EER96530 | Sorghum | nucleus | 71.24 | 68.55 |
| Zm00001d005578_P001 | Maize | nucleus | 66.67 | 60.0 |
| Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 38.56 | 48.76 |
| Solyc03g033730.1.1 | Tomato | nucleus | 31.37 | 41.74 |
| KRH60802 | Soybean | nucleus | 40.52 | 40.0 |
| KRH51497 | Soybean | nucleus, plastid | 35.95 | 39.86 |
| Solyc04g080740.1.1 | Tomato | nucleus | 37.91 | 39.46 |
| VIT_03s0038g04450.t01 | Wine grape | nucleus | 39.87 | 38.85 |
| PGSC0003DMT400009493 | Potato | nucleus | 37.91 | 38.67 |
| GSMUA_Achr10P... | Banana | nucleus | 37.91 | 37.66 |
| Solyc02g084860.1.1 | Tomato | nucleus | 35.29 | 37.5 |
| PGSC0003DMT400009068 | Potato | nucleus | 35.29 | 37.5 |
| KRH24436 | Soybean | nucleus | 39.22 | 37.5 |
| CDX69072 | Canola | nucleus | 37.25 | 37.01 |
| CDX75445 | Canola | nucleus | 36.6 | 36.36 |
| Solyc01g109880.2.1 | Tomato | nucleus | 38.56 | 36.2 |
| KRH15149 | Soybean | nucleus | 39.22 | 36.14 |
| KRH29414 | Soybean | nucleus | 39.22 | 36.14 |
| CDX72490 | Canola | nucleus | 35.95 | 35.95 |
| Bra034639.1-P | Field mustard | nucleus | 33.33 | 35.92 |
| CDX76292 | Canola | nucleus | 33.33 | 35.92 |
| PGSC0003DMT400088166 | Potato | nucleus | 33.33 | 35.42 |
| Solyc01g079480.2.1 | Tomato | nucleus | 33.33 | 35.42 |
| Bra017664.1-P | Field mustard | nucleus | 35.29 | 35.29 |
| CDY45319 | Canola | nucleus | 35.29 | 35.29 |
| PGSC0003DMT400043542 | Potato | nucleus | 36.6 | 35.22 |
| CDY31528 | Canola | nucleus | 32.68 | 35.21 |
| CDY17470 | Canola | nucleus | 32.68 | 35.21 |
| PGSC0003DMT400040054 | Potato | nucleus | 30.07 | 34.85 |
| Solyc01g100460.2.1 | Tomato | nucleus | 31.37 | 34.78 |
| Solyc06g009640.1.1 | Tomato | nucleus | 32.68 | 34.72 |
| PGSC0003DMT400018832 | Potato | nucleus | 32.68 | 34.72 |
| VIT_18s0001g13040.t01 | Wine grape | nucleus | 34.64 | 34.42 |
| KRH58937 | Soybean | nucleus, plastid | 36.6 | 34.36 |
| PGSC0003DMT400079474 | Potato | nucleus | 37.25 | 34.34 |
| CDY29220 | Canola | nucleus | 34.64 | 34.19 |
| PGSC0003DMT400007165 | Potato | nucleus | 30.72 | 34.06 |
| PGSC0003DMT400085559 | Potato | nucleus | 30.72 | 34.06 |
| VIT_14s0060g01210.t01 | Wine grape | nucleus | 32.03 | 33.79 |
| Solyc10g054010.1.1 | Tomato | nucleus | 35.95 | 33.74 |
| Bra024478.1-P | Field mustard | nucleus | 33.99 | 33.55 |
| AT4G34590.1 | Thale cress | nucleus | 34.64 | 33.33 |
| VIT_04s0023g02430.t01 | Wine grape | nucleus | 33.99 | 33.12 |
| KRH51803 | Soybean | nucleus, plastid | 32.68 | 32.68 |
| KRH61129 | Soybean | nucleus, plastid | 32.68 | 32.68 |
| CDY30327 | Canola | nucleus, plastid | 35.29 | 32.14 |
| Bra037235.1-P | Field mustard | nucleus, plastid | 35.29 | 32.14 |
| AT1G75390.1 | Thale cress | nucleus | 35.95 | 31.79 |
| Bra039631.1-P | Field mustard | nucleus | 34.64 | 31.55 |
| CDY53277 | Canola | nucleus, plastid | 34.64 | 31.55 |
| PGSC0003DMT400058187 | Potato | nucleus | 33.99 | 31.33 |
| Bra011545.1-P | Field mustard | nucleus | 36.6 | 31.28 |
| Bra007679.1-P | Field mustard | nucleus | 28.76 | 31.21 |
| CDY11421 | Canola | nucleus | 28.76 | 31.21 |
| CDX76636 | Canola | nucleus | 28.76 | 31.21 |
| CDY20909 | Canola | nucleus | 34.64 | 31.18 |
| CDY46312 | Canola | nucleus | 33.99 | 30.95 |
| TraesCS6B01G124700.1 | Wheat | nucleus, plastid | 35.29 | 30.86 |
| KRH05862 | Soybean | nucleus | 38.56 | 30.73 |
| CDY25111 | Canola | nucleus | 26.8 | 30.6 |
| Bra003500.1-P | Field mustard | nucleus | 26.8 | 30.6 |
| CDX67893 | Canola | nucleus | 26.8 | 30.6 |
| AT2G18160.1 | Thale cress | nucleus | 33.99 | 30.41 |
| CDY39029 | Canola | nucleus | 31.37 | 30.38 |
| KRG96525 | Soybean | nucleus | 29.41 | 30.0 |
| KRH68258 | Soybean | nucleus | 29.41 | 30.0 |
| VIT_07s0005g01450.t01 | Wine grape | nucleus | 28.1 | 29.66 |
| CDX68131 | Canola | nucleus | 34.64 | 29.61 |
| Bra003755.1-P | Field mustard | nucleus | 34.64 | 29.61 |
| CDX85891 | Canola | nucleus | 33.99 | 29.55 |
| AT3G62420.1 | Thale cress | nucleus | 28.1 | 29.45 |
| CDY52079 | Canola | nucleus | 30.07 | 29.11 |
| Bra008192.1-P | Field mustard | nucleus | 31.37 | 29.09 |
| KRH69221 | Soybean | nucleus | 28.1 | 28.86 |
| TraesCS1B01G091500.1 | Wheat | nucleus | 28.1 | 28.67 |
| VIT_05s0077g01140.t01 | Wine grape | nucleus | 28.1 | 27.92 |
| KRH31798 | Soybean | nucleus | 27.45 | 27.63 |
| TraesCS3B01G226200.1 | Wheat | nucleus, plastid | 26.8 | 27.52 |
| TraesCS5B01G094300.1 | Wheat | nucleus | 28.1 | 27.39 |
| KRH42848 | Soybean | nucleus | 36.6 | 26.92 |
| KRH65972 | Soybean | nucleus | 20.26 | 25.41 |
| KRH11069 | Soybean | cytosol, plastid | 25.49 | 15.92 |
| Bra015847.1-P | Field mustard | nucleus | 31.37 | 13.41 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G176700.1 | EnsemblPlantsGene:TraesCS5B01G176700 | Gene3D:1.20.5.170 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:bZIP | ncoils:Coil | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF163 | PFAM:PF00170 | ScanProsite:PS00036 |
| SEG:seg | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:cd14702 | MapMan:15.5.4.1 | : |
Description
No Description!
Coordinates
chr5B:+:322858931..322859812
Molecular Weight (calculated)
16790.8 Da
IEP (calculated)
8.773
GRAVY (calculated)
-0.604
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSGTSFASS QGTRSSRSAE DCPDLRAQME KRRKRRKESN RESARRSRAK QQHLDDLSSQ VDQLKNQSQQ LSMVLGMTTQ NLVALQAQNS VMQTQKMELE
101: SRLCALGEII CCMNSITNAA NPAAAMGATA SGAYDIFGAG STWSQPIDLY QCF
101: SRLCALGEII CCMNSITNAA NPAAAMGATA SGAYDIFGAG STWSQPIDLY QCF
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.