Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G447500.1 | Wheat | nucleus | 97.19 | 93.84 |
| TraesCS5B01G444100.2 | Wheat | nucleus | 88.78 | 87.0 |
| HORVU5Hr1G106120.3 | Barley | nucleus | 88.01 | 72.33 |
| EER90738 | Sorghum | nucleus | 69.9 | 67.65 |
| Zm00001d034447_P001 | Maize | nucleus | 46.43 | 67.16 |
| Zm00001d034457_P003 | Maize | nucleus | 68.37 | 65.53 |
| Os03t0796900-01 | Rice | nucleus | 67.6 | 62.35 |
| Zm00001d034455_P001 | Maize | nucleus | 43.88 | 61.21 |
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 20.92 | 58.16 |
| Zm00001d013074_P003 | Maize | cytosol | 62.5 | 55.94 |
| CDY05606 | Canola | nucleus | 31.89 | 39.19 |
| Bra020620.1-P | Field mustard | nucleus | 31.38 | 39.05 |
| CDY33887 | Canola | nucleus | 30.87 | 38.41 |
| AT5G28770.2 | Thale cress | nucleus | 30.61 | 38.22 |
| Bra010010.1-P | Field mustard | nucleus | 30.61 | 38.22 |
| CDX86210 | Canola | nucleus | 30.36 | 37.9 |
| CDY48665 | Canola | nucleus | 30.61 | 37.74 |
| Solyc01g097330.2.1 | Tomato | nucleus | 40.05 | 34.58 |
| PGSC0003DMT400050096 | Potato | nucleus | 38.52 | 33.48 |
| TraesCS5A01G057500.2 | Wheat | nucleus | 24.74 | 32.55 |
| KRG89569 | Soybean | nucleus | 17.6 | 32.09 |
| CDX78251 | Canola | nucleus | 30.61 | 31.25 |
| CDX73466 | Canola | nucleus | 30.1 | 31.22 |
| Bra007083.1-P | Field mustard | nucleus | 30.36 | 30.99 |
| Bra000102.1-P | Field mustard | nucleus | 28.57 | 30.6 |
| CDY07692 | Canola | nucleus | 28.83 | 30.29 |
| CDY14423 | Canola | nucleus | 28.57 | 30.11 |
| CDY55832 | Canola | nucleus | 23.21 | 28.89 |
| AT3G54620.1 | Thale cress | nucleus | 29.34 | 28.54 |
| TraesCS7A01G488600.2 | Wheat | nucleus | 17.86 | 27.89 |
| CDY21903 | Canola | nucleus | 27.81 | 27.66 |
| AT4G02640.2 | Thale cress | nucleus | 28.83 | 27.1 |
| Bra036251.1-P | Field mustard | nucleus | 26.53 | 26.4 |
| CDY22069 | Canola | nucleus | 26.28 | 26.08 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 20.41 | 25.48 |
| TraesCS1A01G329900.1 | Wheat | nucleus | 23.47 | 25.14 |
| VIT_00s1609g00010.t01 | Wine grape | cytosol | 5.36 | 14.58 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF90 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5A01G440400 | EnsemblPlants:TraesCS5A01G440400.1 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:-:621759496..621764024
Molecular Weight (calculated)
41252.1 Da
IEP (calculated)
4.811
GRAVY (calculated)
-0.509
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MERVFSVEEI PDPFWGQPSP RPAAAGGGGA EGAMNRCPSE WCFQKFLEEA VLDSPAADPT PMAGASGGGA AQVKQTAAAA ASGAVVDPVE YNAMLKQKLE
101: KDLAAVAMWR ASGAMPPERF AANPSLPNAD VQHIGTINPI GGNVVPVQNK LAGGASGVLG PQLVQNADAL VKQAASSSSR EQSEDDDMEG EDEITGNGAP
201: TDQRLRRRKQ SNRESARRSR SRKAAHLNEL EAQVSQLRVE NSSLLRRLAD VNQKYNGAAV DNRVLKADVE TLRAKVKMAE DSVKRVTGMS ALFPAGSDMS
301: SLSMPFTGSP SEATSDAAVP DDLSAYFSTS EAGGNNGYMP EMASSAQEDD NFLNEAMDTG KMGRPDSLHR VASLEHLQKR MCGGPASSGS TS
101: KDLAAVAMWR ASGAMPPERF AANPSLPNAD VQHIGTINPI GGNVVPVQNK LAGGASGVLG PQLVQNADAL VKQAASSSSR EQSEDDDMEG EDEITGNGAP
201: TDQRLRRRKQ SNRESARRSR SRKAAHLNEL EAQVSQLRVE NSSLLRRLAD VNQKYNGAAV DNRVLKADVE TLRAKVKMAE DSVKRVTGMS ALFPAGSDMS
301: SLSMPFTGSP SEATSDAAVP DDLSAYFSTS EAGGNNGYMP EMASSAQEDD NFLNEAMDTG KMGRPDSLHR VASLEHLQKR MCGGPASSGS TS
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.