Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G440400.1 | Wheat | nucleus | 87.0 | 88.78 |
| TraesCS5D01G447500.1 | Wheat | nucleus | 89.25 | 87.93 |
| HORVU5Hr1G106120.3 | Barley | nucleus | 91.0 | 76.31 |
| Zm00001d034447_P001 | Maize | nucleus | 47.5 | 70.11 |
| Zm00001d034457_P003 | Maize | nucleus | 70.25 | 68.7 |
| EER90738 | Sorghum | nucleus | 69.0 | 68.15 |
| Os03t0796900-01 | Rice | nucleus | 69.75 | 65.65 |
| Zm00001d034455_P001 | Maize | nucleus | 45.0 | 64.06 |
| Zm00001d013074_P003 | Maize | cytosol | 64.75 | 59.13 |
| Solyc08g022080.2.1 | Tomato | mitochondrion, nucleus | 20.25 | 57.45 |
| CDY05606 | Canola | nucleus | 31.5 | 39.5 |
| Bra020620.1-P | Field mustard | nucleus | 31.0 | 39.37 |
| Bra010010.1-P | Field mustard | nucleus | 30.5 | 38.85 |
| CDY33887 | Canola | nucleus | 30.5 | 38.73 |
| CDY48665 | Canola | nucleus | 30.75 | 38.68 |
| CDX86210 | Canola | nucleus | 30.25 | 38.53 |
| AT5G28770.2 | Thale cress | nucleus | 28.5 | 36.31 |
| Solyc01g097330.2.1 | Tomato | nucleus | 40.25 | 35.46 |
| PGSC0003DMT400050096 | Potato | nucleus | 39.5 | 35.03 |
| KRG89569 | Soybean | nucleus | 17.25 | 32.09 |
| TraesCS5B01G059200.1 | Wheat | nucleus | 23.5 | 31.54 |
| TraesCS1B01G343500.1 | Wheat | nucleus | 31.75 | 31.05 |
| CDX78251 | Canola | nucleus | 29.75 | 30.99 |
| CDX73466 | Canola | nucleus | 29.25 | 30.95 |
| Bra000102.1-P | Field mustard | nucleus | 28.25 | 30.87 |
| Bra007083.1-P | Field mustard | nucleus | 29.5 | 30.73 |
| CDY07692 | Canola | nucleus | 28.5 | 30.56 |
| CDY14423 | Canola | nucleus | 28.0 | 30.11 |
| CDY55832 | Canola | nucleus | 23.0 | 29.21 |
| AT3G54620.1 | Thale cress | nucleus | 28.5 | 28.29 |
| CDY21903 | Canola | nucleus | 27.75 | 28.17 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 17.0 | 27.42 |
| AT4G02640.2 | Thale cress | nucleus | 28.5 | 27.34 |
| CDY22069 | Canola | nucleus | 26.75 | 27.09 |
| Bra036251.1-P | Field mustard | nucleus | 26.5 | 26.9 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 20.25 | 25.88 |
| VIT_00s1609g00010.t01 | Wine grape | cytosol | 5.25 | 14.58 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | InterPro:Basic_leucine-zipper_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | PFAM:PF00170 | PFAM:PF12498 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF90 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5B01G444100 | EnsemblPlants:TraesCS5B01G444100.2 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:616652626..616656341
Molecular Weight (calculated)
41948.9 Da
IEP (calculated)
4.884
GRAVY (calculated)
-0.472
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGVFSVEE IPDPFWGQPS PRPAGAAGGG GAEGAMNRCP SEWYFQKFLE EAVLDSPAAD PAPMAGASGA GAAQVKQTAA AAAAAAPAAT GAVVDPVEYN
101: AMLKQKLEKD LAAVAMWRAS GAMPPERFAA SPSLPNADVQ HIGTINPIGG KVVPVQNKLA VGASGMSGPH LVQNADALVK QAASSSSREQ SEDDDMEGED
201: EITGNGVPTD QRLRRRKQSN RESARRSRSR KAAHLNELEA QVSQLRVENS SLLRRLADVN QKYNGAAVDN RVLKADVETL RAKVKMAEDS VKRVTGMSAL
301: FPAGSDMSSL SMPFTGSPSE ATSDAAVPDD LSAYFSTSEA GGNNGYMPEM ASSAQEDDNF LNEAMDTGKM GRPDSLHRVA SLEHLQQRMC GGPASSGSTS
101: AMLKQKLEKD LAAVAMWRAS GAMPPERFAA SPSLPNADVQ HIGTINPIGG KVVPVQNKLA VGASGMSGPH LVQNADALVK QAASSSSREQ SEDDDMEGED
201: EITGNGVPTD QRLRRRKQSN RESARRSRSR KAAHLNELEA QVSQLRVENS SLLRRLADVN QKYNGAAVDN RVLKADVETL RAKVKMAEDS VKRVTGMSAL
301: FPAGSDMSSL SMPFTGSPSE ATSDAAVPDD LSAYFSTSEA GGNNGYMPEM ASSAQEDDNF LNEAMDTGKM GRPDSLHRVA SLEHLQQRMC GGPASSGSTS
001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ
Arabidopsis Description
BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.