Factsheet for PGSC0003DMT400050096

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g097330.2.1	Tomato	nucleus	81.37	80.84
VIT_14s0030g02200.t01	Wine grape	nucleus	54.32	57.92
GSMUA_Achr10P...	Banana	nucleus	28.16	57.21
KRG96973	Soybean	nucleus	45.9	56.1
KRH34085	Soybean	nucleus	51.66	55.88
KRG92673	Soybean	nucleus	47.45	53.1
Bra020620.1-P	Field mustard	nucleus	35.26	50.48
GSMUA_Achr7P07650_001	Banana	nucleus	25.28	50.22
CDY05606	Canola	nucleus	35.48	50.16
CDY33887	Canola	nucleus	34.81	49.84
Zm00001d034447_P001	Maize	nucleus	29.93	49.82
Bra010010.1-P	Field mustard	nucleus	33.92	48.73
CDX86210	Canola	nucleus	33.7	48.41
CDY48665	Canola	nucleus	33.92	48.11
AT5G28770.2	Thale cress	nucleus	33.04	47.45
Zm00001d034455_P001	Maize	nucleus	28.6	45.91
KRH68733	Soybean	nucleus	41.02	44.69
Zm00001d034457_P003	Maize	nucleus	39.91	44.01
EER90738	Sorghum	nucleus	37.47	41.73
TraesCS5A01G057500.2	Wheat	nucleus	26.61	40.27
TraesCS5D01G068800.1	Wheat	nucleus	26.61	40.27
GSMUA_Achr4P28530_001	Banana	nucleus	37.69	40.09
Os03t0796900-01	Rice	nucleus	37.69	40.0
GSMUA_Achr2P12610_001	Banana	nucleus	36.36	39.81
TraesCS5B01G444100.2	Wheat	nucleus	35.03	39.5
TraesCS5B01G059200.1	Wheat	nucleus	25.94	39.26
TraesCS5A01G440400.1	Wheat	nucleus	33.48	38.52
TraesCS5D01G447500.1	Wheat	nucleus	34.15	37.93
Os12t0601800-01	Rice	nucleus	22.39	37.83
Zm00001d013074_P003	Maize	cytosol	36.36	37.44
Zm00001d030995_P002	Maize	nucleus	25.72	37.42
EES16316	Sorghum	nucleus	25.5	36.28
HORVU5Hr1G014170.10	Barley	nucleus, plastid	27.49	33.42
HORVU5Hr1G106120.3	Barley	nucleus	35.26	33.33
Os07t0182000-01	Rice	nucleus	27.72	28.67
TraesCS1D01G332200.1	Wheat	nucleus	24.17	27.05
KXG34539	Sorghum	nucleus	24.17	26.98
TraesCS1B01G343500.1	Wheat	nucleus	24.17	26.65
Zm00001d018971_P003	Maize	nucleus	25.28	25.0
PGSC0003DMT400038493	Potato	nucleus	18.85	24.36
EER95953	Sorghum	nucleus	23.95	24.27
HORVU1Hr1G077530.1	Barley	nucleus	21.51	23.72
TraesCS1A01G329900.1	Wheat	nucleus	17.96	22.13

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:102583727	MapMan:15.5.4.1	MapMan:15.5.4.2	InterPro:Basic_leucine-zipper_C	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009719	GO:GO:0009987	GO:GO:0019725	GO:GO:0042802	GO:GO:0046982
GO:GO:0071215	GO:GO:0071333	InterPro:IPR004827	UniProt:M1BPR9	PFAM:PF00170	PFAM:PF12498
EnsemblPlantsGene:PGSC0003DMG400019455	PGSC:PGSC0003DMG400019455	EnsemblPlants:PGSC0003DMT400050096	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF348	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000295C254	RefSeq:XP_006347748.1	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

BZIP transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400019455]

Coordinates

chr1:+:75058445..75064475

Molecular Weight (calculated)

48562.4 Da

IEP (calculated)

6.615

GRAVY (calculated)

-0.702

Length

451 amino acids

Sequence
(BLAST)

001: MDRVFSVDDD IGDHFWSTPP TAELGVDSPT SAATAAISYS KMMNRSSSEW AFQRFLQEAA GTTTSSPPLP PTMASSSSSS HQNDVVEIKD ENLSTPNLNS
101: STALNSKPAA TSFASAPPQN IPVDAEEYQA FLKNRLDLAC AAVALTRAKN LKPQDSSSIA PDKGPETASA SQSVSHISTK GSGQEVRKVQ DKDSGGPVGI
201: PSLPSVQKKP VVQVKSTTSG SSRELSDDDE AEGEAETTQG TDPADTKRVR RMLSNRESAR RSRRRKQAHL TELETQVSQL RVENSSLLKR LTDISQKYNE
301: SAVDNRVLKA DVETLRAKVK MAEETVKRVT GLNPLFQAMS EMSSMAMPSF SGSPSDTSTD TALPVQDDPQ HHYYQQPPNN HMPTHDPRIQ NGMVDVPPIG
401: GSVQQNLAAA AVGGNKMGRT ASMQRVASLE HLQKRIRGEV SSCGTQGRGE Q

Best Arabidopsis Sequence Match ( AT5G28770.2 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRG TFIKPQDTSG
101: RSDNGGANES EQASLASSKA TPMMSSAITS GSELSGDEEE ADGETNMNPT NVKRVKRMLS NRESARRSRR RKQAHLSELE TQVSQLRVEN SKLMKGLTDV
201: TQTFNDASVE NRVLKANIET LRAKVKMAEE TVKRLTGFNP MFHNMPQIVS TVSLPSETSN SPDTTSSQVT TPEIISSGNK GKALIGCKMN RTASMRRVES
301: LEHLQKRIRS VGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.