Factsheet for Os12t0601800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0911700-02
Os02t0175100-01
Os02t0266800-01
Os03t0796900-01
Os06t0662200-01
Os07t0182000-01
Os08t0357300-01
Os09t0306400-01
Os12t0601800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54620.1	Os08t0357300-01	AT1G75390.1	16709202
AT3G54620.1	Os09t0306400-01	AT1G75390.1	16709202
AT3G54620.1	Os08t0357300-01	AT2G18160.1	16709202
AT3G54620.1	Os09t0306400-01	AT2G18160.1	16709202
AT3G54620.1	Os01t0911700-02	AT3G24650.1	12657652
AT3G54620.1	Os03t0796900-01	AT3G54620.1	16709202
AT3G54620.1	Os07t0182000-01	AT3G54620.1	16709202
AT3G54620.1	Os12t0601800-01	AT3G54620.1	16709202
AT3G54620.1	Os08t0357300-01	AT3G62420.1	16709202
AT3G54620.1	Os09t0306400-01	AT3G62420.1	16709202
AT3G54620.1	Os08t0357300-01	AT3G62420.1	16810321
AT3G54620.1	Os09t0306400-01	AT3G62420.1	16810321
AT3G54620.1	Os08t0357300-01	AT4G34590.1	16709202
AT3G54620.1	Os09t0306400-01	AT4G34590.1	16709202
AT3G54620.1	Os02t0175100-01	AT5G24800.1	16709202
AT3G54620.1	Os02t0266800-01	AT5G24800.1	16709202
AT3G54620.1	Os06t0662200-01	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d030995_P002	Maize	nucleus	49.44	42.58
Solyc08g022080.2.1	Tomato	mitochondrion, nucleus	22.47	42.55
TraesCS5D01G068800.1	Wheat	nucleus	44.57	39.93
TraesCS5B01G059200.1	Wheat	nucleus	44.57	39.93
TraesCS5A01G057500.2	Wheat	nucleus	44.57	39.93
EES16316	Sorghum	nucleus	47.19	39.75
GSMUA_Achr10P...	Banana	nucleus	31.46	37.84
HORVU5Hr1G014170.10	Barley	nucleus, plastid	45.69	32.88
KRG89569	Soybean	nucleus	22.47	27.91
CDX86210	Canola	nucleus	32.21	27.39
Bra010010.1-P	Field mustard	nucleus	31.84	27.07
CDY48665	Canola	nucleus	32.21	27.04
Bra020620.1-P	Field mustard	nucleus	30.71	26.03
CDY05606	Canola	nucleus	31.09	26.02
AT5G28770.2	Thale cress	nucleus	30.34	25.8
CDY33887	Canola	nucleus	30.34	25.71
Os02t0175100-01	Rice	mitochondrion, nucleus	24.34	23.47
Solyc01g097330.2.1	Tomato	nucleus	38.2	22.47
PGSC0003DMT400050096	Potato	nucleus	37.83	22.39
Os06t0662200-01	Rice	nucleus	24.72	22.37
Os02t0266800-01	Rice	nucleus	24.34	21.81
Os03t0796900-01	Rice	nucleus	33.71	21.18
CDY55832	Canola	nucleus	23.97	20.32
Bra000102.1-P	Field mustard	nucleus	26.22	19.13
CDX78251	Canola	nucleus	26.97	18.75
CDY14423	Canola	nucleus	25.84	18.55
CDX73466	Canola	nucleus	25.84	18.25
CDY07692	Canola	nucleus	25.47	18.23
Bra036251.1-P	Field mustard	nucleus	26.59	18.02
CDY21903	Canola	nucleus	26.59	18.02
Bra007083.1-P	Field mustard	nucleus	25.47	17.71
CDY22069	Canola	nucleus	25.84	17.47
AT3G54620.1	Thale cress	nucleus	25.47	16.87
Os07t0182000-01	Rice	nucleus	26.97	16.51
AT4G02640.2	Thale cress	nucleus	25.47	16.31

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:107276775	MapMan:15.5.4.1	MapMan:15.5.4.2	UniProt:A0A0N7KUB6	ProteinID:BAT17962.1
InterPro:Basic_leucine-zipper_C	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlantsGene:Os12g0601800
EnsemblPlants:Os12t0601800-01	PFAM:PF00170	PFAM:PF12498	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF165	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0003939D9B	RefSeq:XP_015620822.1	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 88Similar to BZIP transcription factor family protein, expressed. (Os12t0601800-01)

Coordinates

chr12:+:25332774..25336537

Molecular Weight (calculated)

29069.5 Da

IEP (calculated)

4.936

GRAVY (calculated)

-0.730

Length

267 amino acids

Sequence
(BLAST)

001: MAFQLEAKLQ ESSLGYLNLQ ASDTSQLVSQ DSFNGYGSTR VTNSNAIHED DDQGKPANSG TSKEQSDDDG DLEEDTDPVN AKRTRRMLSN RESARRSRKR
101: KQAHLNDLES QVSQLRSENA SLQKRLSDMT QKYKQSTTEY GNLQDDMNAM RRKVNIAEEA VRRVTGIGLQ LFTTSEMPAS SMPVSSGVSD AASAAAAAAL
201: VEDDWTNCSL PDEAIPVPSA AMALRSPSVR RVASLENLQK RIHAGDVTHF EAASALSLPE ATACDNK

Best Arabidopsis Sequence Match ( AT5G28770.1 )
(BLAST)

001: MEKVFSDEEI SGNHHWSVNG MTSLNRSASE WAFNRFIQES SAAADDGEST TACGVSVSSP PNVPVDSEEY RAFLKSKLNL ACAAVAMKRD TSGRSDNGGA
101: NESEQASLAS SKATPMMSSA ITSGSELSGD EEEADGETNM NPTNVKRVKR MLSNRESARR SRRRKQAHLS ELETQVSQLR VENSKLMKGL TDVTQTFNDA
201: SVENRVLKAN IETLRAKVKM AEETVKRLTG FNPMFHNMPQ IVSTVSLPSE TSNSPDTTSS QVTTPEIISS GNKGKALIGC KMNRTASMRR VESLEHLQKR
301: IRSVGDQ

Arabidopsis Description

BZIP63Basic leucine zipper 63 [Source:UniProtKB/Swiss-Prot;Acc:B9DGI8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.