Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
22189955
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90165 | Sorghum | nucleus | 56.61 | 58.19 |
| Zm00001d046937_P001 | Maize | nucleus | 54.58 | 57.09 |
| Zm00001d003529_P001 | Maize | cytosol | 22.37 | 51.16 |
| TraesCS7A01G488600.2 | Wheat | nucleus | 40.0 | 47.01 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 38.98 | 46.37 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 38.31 | 45.75 |
| Zm00001d050588_P002 | Maize | nucleus | 31.86 | 41.41 |
| Os02t0266800-01 | Rice | nucleus | 37.29 | 36.91 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 34.58 | 36.82 |
| KRH16196 | Soybean | cytosol, nucleus | 16.27 | 31.79 |
| AT5G24800.1 | Thale cress | nucleus | 29.49 | 31.41 |
| CDY05397 | Canola | nucleus | 29.49 | 31.3 |
| CDX88132 | Canola | nucleus | 29.49 | 31.3 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 26.44 | 31.08 |
| CDX80469 | Canola | nucleus | 29.15 | 30.94 |
| CDY05458 | Canola | nucleus | 29.15 | 30.94 |
| Bra020471.1-P | Field mustard | nucleus | 29.15 | 29.76 |
| Bra009793.1-P | Field mustard | nucleus | 29.15 | 29.55 |
| KRH52637 | Soybean | nucleus | 28.81 | 29.51 |
| KRH61976 | Soybean | nucleus | 29.83 | 29.33 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 31.53 | 26.65 |
| PGSC0003DMT400038493 | Potato | nucleus | 30.85 | 26.07 |
| Solyc08g006110.2.1 | Tomato | nucleus | 30.51 | 25.64 |
| Os12t0601800-01 | Rice | nucleus | 22.37 | 24.72 |
| KRH04810 | Soybean | nucleus | 26.1 | 24.14 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 28.14 | 24.06 |
| Os03t0796900-01 | Rice | nucleus | 28.81 | 20.0 |
| Os07t0182000-01 | Rice | nucleus | 23.73 | 16.05 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | EntrezGene:4341753 | EMBL:AB053474 | ProteinID:BAD45854.1 |
| ProteinID:BAF20195.1 | ProteinID:BAS98995.1 | ncoils:Coil | ProteinID:EEE66169.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlantsGene:Os06g0662200 | EnsemblPlants:Os06t0662200-01 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF113 | UniProt:Q654B3 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI00000A3FDB | RefSeq:XP_015643805.1 | InterPro:bZIP | SEG:seg | : |
Description
RICE SEED B-ZIPPER 5Basic leucine zipper (bZIP) transcription factor, Negative regulator of cold and drought stress response (Os06t0662200-01)
Coordinates
chr6:-:27299932..27302104
Molecular Weight (calculated)
31927.5 Da
IEP (calculated)
7.221
GRAVY (calculated)
-0.637
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKKCPSELQ LEAFIREEAG AGDRKPGVLS PGDGARKSGL FSPGDGEMSV LDQSTLDGSG GGHQLWWPES VRTPPRAAAA FSATADERTP ASISDDPKPT
101: TSANHAPESD SDSDCDSLLE AERSPRLRGT KSTETKRIRR MVSNRESARR SRRRKQAQLS ELESQVEQLK GENSSLFKQL TESSQQFNTA VTDNRILKSD
201: VEALRVKVKM AEDMVARAAM SCGLGQLGLA PLLSSRKMCQ ALDMLSLPRN DACGFKGLNL GRQVQNSPVQ SAASLESLDN RISSEVTSCS ADVWP
101: TSANHAPESD SDSDCDSLLE AERSPRLRGT KSTETKRIRR MVSNRESARR SRRRKQAQLS ELESQVEQLK GENSSLFKQL TESSQQFNTA VTDNRILKSD
201: VEALRVKVKM AEDMVARAAM SCGLGQLGLA PLLSSRKMCQ ALDMLSLPRN DACGFKGLNL GRQVQNSPVQ SAASLESLDN RISSEVTSCS ADVWP
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.