Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61976 | Soybean | nucleus | 75.69 | 72.67 |
| KRH16196 | Soybean | cytosol, nucleus | 27.08 | 51.66 |
| AT5G24800.1 | Thale cress | nucleus | 35.42 | 36.82 |
| CDX88132 | Canola | nucleus | 35.42 | 36.69 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 44.44 | 36.68 |
| KRH04810 | Soybean | nucleus | 39.93 | 36.05 |
| CDX80469 | Canola | nucleus | 34.03 | 35.25 |
| CDY05397 | Canola | nucleus | 34.03 | 35.25 |
| CDY05458 | Canola | nucleus | 34.03 | 35.25 |
| Bra020471.1-P | Field mustard | nucleus | 35.07 | 34.95 |
| Zm00001d003529_P001 | Maize | cytosol | 15.62 | 34.88 |
| Bra009793.1-P | Field mustard | nucleus | 35.07 | 34.71 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 29.86 | 34.26 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 28.47 | 33.06 |
| KXG29589 | Sorghum | nucleus | 36.46 | 32.81 |
| TraesCS7A01G488600.2 | Wheat | nucleus | 27.78 | 31.87 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 26.74 | 31.17 |
| Zm00001d050588_P002 | Maize | nucleus | 23.96 | 30.4 |
| Os02t0266800-01 | Rice | nucleus | 30.9 | 29.87 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 28.47 | 29.6 |
| Zm00001d046937_P001 | Maize | nucleus | 28.82 | 29.43 |
| Os06t0662200-01 | Rice | nucleus | 29.51 | 28.81 |
| KRG89569 | Soybean | nucleus | 20.83 | 27.91 |
| Zm00001d015421_P001 | Maize | nucleus | 31.94 | 27.79 |
| EER90165 | Sorghum | nucleus | 27.43 | 27.53 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 27.78 | 25.56 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 27.78 | 25.48 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 27.43 | 25.24 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 29.86 | 24.93 |
| PGSC0003DMT400038493 | Potato | nucleus | 29.86 | 24.64 |
| Solyc08g006110.2.1 | Tomato | nucleus | 29.51 | 24.22 |
| KRG96973 | Soybean | nucleus | 27.78 | 21.68 |
| KRG92673 | Soybean | nucleus | 28.12 | 20.1 |
| KRH34085 | Soybean | nucleus | 27.08 | 18.7 |
| KRH68733 | Soybean | nucleus | 26.39 | 18.36 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 15.97 | 16.03 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | EntrezGene:778131 | EMBL:ACUP02003425 | ncoils:Coil |
| EMBL:DQ787039 | EnsemblPlantsGene:GLYMA_06G079800 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlants:KRH52637 | ProteinID:KRH52637 | ProteinID:KRH52637.1 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF113 | UniProt:Q0GPH5 | SMART:SM00338 |
| SUPFAM:SSF57959 | UniParc:UPI0000DDB488 | InterPro:bZIP | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:6127108..6132231
Molecular Weight (calculated)
31770.9 Da
IEP (calculated)
5.625
GRAVY (calculated)
-0.676
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMTTTTESD LDYELRYLSL AVTDTFTAFQ NLLPDAMTSF SACGLIDPLC SQNLTPKHST ITATIDSQSS ICATSNVGSP VSANKPEGRE NHTKGATSGS
101: SEPSDEDDEA GACEQSTNPA DMKRLRRKVS NRDSARRSRR RKQAQLSDLE LQVEKLKVEN ATLYKQFTDA SQHFREADTN NRVLKSDVEA LRAKVKLAED
201: MVTRSSFTTL NNQLLQTQHH QMSTPQQLNT TNLRRMAHVS PTITVHGNDV SYNNGGQNSA LGNLDMSFND INEVMNDAMS CGTIWPLD
101: SEPSDEDDEA GACEQSTNPA DMKRLRRKVS NRDSARRSRR RKQAQLSDLE LQVEKLKVEN ATLYKQFTDA SQHFREADTN NRVLKSDVEA LRAKVKLAED
201: MVTRSSFTTL NNQLLQTQHH QMSTPQQLNT TNLRRMAHVS PTITVHGNDV SYNNGGQNSA LGNLDMSFND INEVMNDAMS CGTIWPLD
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.