Factsheet for Os02t0266800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0267900-01
Os01t0279300-01
Os01t0810300-01
Os02t0175100-01
Os02t0266800-01
Os03t0319300-01
Os03t0796900-01
Os05t0491000-01
Os05t0491100-01
Os06t0662200-01
Os07t0182000-01
Os07t0687200-02
Os08t0357300-01
Os09t0306400-01
Os12t0601800-01
Os12t0603800-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G24800.1	Os08t0357300-01	AT1G75390.1	16709202
AT5G24800.1	Os09t0306400-01	AT1G75390.1	16709202
AT5G24800.1	Os08t0357300-01	AT2G18160.1	16709202
AT5G24800.1	Os09t0306400-01	AT2G18160.1	16709202
AT5G24800.1	Os01t0267900-01	AT2G41090.1	17360592
AT5G24800.1	Os01t0279300-01	AT2G41090.1	17360592
AT5G24800.1	Os01t0810300-01	AT2G41090.1	17360592
AT5G24800.1	Os03t0319300-01	AT2G41090.1	17360592
AT5G24800.1	Os05t0491000-01	AT2G41090.1	17360592
AT5G24800.1	Os05t0491100-01	AT2G41090.1	17360592
AT5G24800.1	Os07t0687200-02	AT2G41090.1	17360592
AT5G24800.1	Os12t0603800-00	AT2G41090.1	17360592
AT5G24800.1	Os03t0796900-01	AT3G54620.1	16709202
AT5G24800.1	Os07t0182000-01	AT3G54620.1	16709202
AT5G24800.1	Os12t0601800-01	AT3G54620.1	16709202
AT5G24800.1	Os08t0357300-01	AT3G62420.1	16709202
AT5G24800.1	Os09t0306400-01	AT3G62420.1	16709202
AT5G24800.1	Os08t0357300-01	AT3G62420.1	16810321
AT5G24800.1	Os09t0306400-01	AT3G62420.1	16810321
AT5G24800.1	Os08t0357300-01	AT4G34590.1	16709202
AT5G24800.1	Os09t0306400-01	AT4G34590.1	16709202
AT5G24800.1	Os01t0267900-01	AT5G21274.1	17360592
AT5G24800.1	Os01t0279300-01	AT5G21274.1	17360592
AT5G24800.1	Os01t0810300-01	AT5G21274.1	17360592
AT5G24800.1	Os03t0319300-01	AT5G21274.1	17360592
AT5G24800.1	Os05t0491000-01	AT5G21274.1	17360592
AT5G24800.1	Os05t0491100-01	AT5G21274.1	17360592
AT5G24800.1	Os07t0687200-02	AT5G21274.1	17360592
AT5G24800.1	Os12t0603800-00	AT5G21274.1	17360592
AT5G24800.1	Os02t0175100-01	AT5G24800.1	16709202
AT5G24800.1	Os02t0266800-01	AT5G24800.1	16709202
AT5G24800.1	Os06t0662200-01	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0175100-01	Rice	mitochondrion, nucleus	61.41	66.06
KXG29589	Sorghum	nucleus	57.05	53.12
Zm00001d015421_P001	Maize	nucleus	56.38	50.76
TraesCS6D01G144400.2	Wheat	nucleus	51.34	48.88
TraesCS6B01G182500.5	Wheat	nucleus	50.0	47.6
TraesCS6A01G154600.2	Wheat	nucleus	49.33	46.82
GSMUA_Achr1P23640_001	Banana	nucleus	33.56	39.84
Os06t0662200-01	Rice	nucleus	36.91	37.29
KRH16196	Soybean	cytosol, nucleus	17.45	34.44
CDX88132	Canola	nucleus	29.87	32.01
KRH04810	Soybean	nucleus	34.23	31.97
VIT_04s0008g02750.t01	Wine grape	nucleus	36.91	31.52
AT5G24800.1	Thale cress	nucleus	29.19	31.41
Bra009793.1-P	Field mustard	nucleus	30.54	31.27
KRH52637	Soybean	nucleus	29.87	30.9
CDY05397	Canola	nucleus	28.52	30.58
CDX80469	Canola	nucleus	28.52	30.58
CDY05458	Canola	nucleus	28.19	30.22
Solyc08g006110.2.1	Tomato	nucleus	34.9	29.63
Bra020471.1-P	Field mustard	nucleus	28.19	29.07
PGSC0003DMT400038493	Potato	nucleus	33.89	28.94
KRH61976	Soybean	nucleus	28.86	28.67
HORVU6Hr1G031330.2	Barley	nucleus	27.52	28.57
GSMUA_Achr1P15640_001	Banana	nucleus	32.89	28.41
Os12t0601800-01	Rice	nucleus	21.81	24.34
Os03t0796900-01	Rice	nucleus	26.51	18.59
Os07t0182000-01	Rice	nucleus	24.83	16.97

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	MapMan:15.5.4.2	EntrezGene:4328963	EMBL:AK070674	ProteinID:BAD27900.1
ProteinID:BAF08421.1	ProteinID:BAS78022.1	ncoils:Coil	ProteinID:EEE56704.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EMBL:L34551	EnsemblPlantsGene:Os02g0266800	EnsemblPlants:Os02t0266800-01
PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF347	UniProt:Q6ETX0
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000009D8F5	RefSeq:XP_015625526.1	InterPro:bZIP	SEG:seg

Description

RICE TRANSCRIPTION ACTIVATOR 1Transcriptional activator protein. (Os02t0266800-01)

Coordinates

chr2:-:9535430..9538420

Molecular Weight (calculated)

31747.0 Da

IEP (calculated)

5.031

GRAVY (calculated)

-0.530

Length

298 amino acids

Sequence
(BLAST)

001: MKKCPSELNF EAFFHGERGE DDADAAADQK PGGGPHPPPF AMFSAADLSS FGFADSVTST ITGVIPNHIW PQSQSLNARH PAVYTIESQS SICAAASPTS
101: ATTLNMKESQ TLGGTSGSDS DSESLLDIEG GPCEQSTNPL DVKRMRRMVS NRESARRSRK RKQAHLADLE TQVDQLRGEN ASLFKQLTDA NQQFTTAVTD
201: NRILKSDVEA LRVKVKMAED MVARGALSCG LGHLGGLSPA LNPRQGACRV PDVLTGLDYA GDDPFTGLSP PEQVQMPGGG EVGDAWGWDN HSNGAMSK

Best Arabidopsis Sequence Match ( AT5G24800.1 )
(BLAST)

001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP

Arabidopsis Description

BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.