Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g006110.2.1 | Tomato | nucleus | 70.2 | 69.8 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 28.94 | 36.46 |
| KRH16196 | Soybean | cytosol, nucleus | 15.47 | 35.76 |
| KRH04810 | Soybean | nucleus | 32.38 | 35.42 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 35.24 | 35.24 |
| AT5G24800.1 | Thale cress | nucleus | 27.79 | 35.02 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 24.93 | 34.66 |
| CDX80469 | Canola | nucleus | 27.51 | 34.53 |
| Zm00001d015421_P001 | Maize | nucleus | 32.66 | 34.44 |
| CDY05397 | Canola | nucleus | 27.22 | 34.17 |
| CDY05458 | Canola | nucleus | 27.22 | 34.17 |
| CDX88132 | Canola | nucleus | 27.22 | 34.17 |
| Os02t0266800-01 | Rice | nucleus | 28.94 | 33.89 |
| TraesCS7B01G391800.1 | Wheat | nucleus | 23.5 | 33.06 |
| Bra020471.1-P | Field mustard | nucleus | 27.22 | 32.87 |
| TraesCS7A01G488600.2 | Wheat | nucleus | 23.5 | 32.67 |
| Bra009793.1-P | Field mustard | nucleus | 27.22 | 32.65 |
| TraesCS7D01G475100.1 | Wheat | nucleus | 22.92 | 32.39 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 28.65 | 31.95 |
| KXG29589 | Sorghum | nucleus | 29.23 | 31.88 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 28.65 | 31.85 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 28.08 | 31.31 |
| Zm00001d046937_P001 | Maize | nucleus | 24.93 | 30.85 |
| Os06t0662200-01 | Rice | nucleus | 26.07 | 30.85 |
| Zm00001d003529_P001 | Maize | cytosol | 11.17 | 30.23 |
| KRH52637 | Soybean | nucleus | 24.64 | 29.86 |
| KRH61976 | Soybean | nucleus | 25.5 | 29.67 |
| EER90165 | Sorghum | nucleus | 23.21 | 28.22 |
| Zm00001d050588_P002 | Maize | nucleus | 18.34 | 28.19 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 24.64 | 24.93 |
| PGSC0003DMT400050096 | Potato | nucleus | 24.36 | 18.85 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 15.19 | 18.47 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019725 | GO:GO:0042803 | GO:GO:0046982 | GO:GO:0071333 | InterPro:IPR004827 | UniProt:M1B6Y9 |
| PFAM:PF00170 | EnsemblPlantsGene:PGSC0003DMG400014858 | PGSC:PGSC0003DMG400014858 | EnsemblPlants:PGSC0003DMT400038493 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF113 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI0002952125 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
BZIP transcription factor bZIP16 [Source:PGSC_GENE;Acc:PGSC0003DMG400014858]
Coordinates
chr8:+:2560040..2566027
Molecular Weight (calculated)
38557.4 Da
IEP (calculated)
5.581
GRAVY (calculated)
-0.786
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MANFPSRDMK KSPSVLALEE FVNHNKLFYG EDAKIGDVFG GNDHQQNINN NNNNNINHHD HNNNNGHHHA QLFDDICSIA PSFTMSNQDI LSGFSNCALT
101: EKPLWSPNIT PKQSSISVTG DSQSSICAGS PTPTIIMPKM RDNQAMGATS GSYQSDDDDL EGDVDPCEES TDPSDIKRIR RQASNRESAR RSRRRKQAHL
201: ADLESQVDQF RGENESLFKQ LADATQQYKD SLTNNRVLKS NVEELRAKVK LAEVRAARGS VSSSLNHLFL NYLTPPQSLG TNNNNNNITM CRLDNVSPTI
301: NVPGEDSWGG ISGQNPMIGV ENVNAFDRNL NNGAMSDNAS CISEVWSFK
101: EKPLWSPNIT PKQSSISVTG DSQSSICAGS PTPTIIMPKM RDNQAMGATS GSYQSDDDDL EGDVDPCEES TDPSDIKRIR RQASNRESAR RSRRRKQAHL
201: ADLESQVDQF RGENESLFKQ LADATQQYKD SLTNNRVLKS NVEELRAKVK LAEVRAARGS VSSSLNHLFL NYLTPPQSLG TNNNNNNITM CRLDNVSPTI
301: NVPGEDSWGG ISGQNPMIGV ENVNAFDRNL NNGAMSDNAS CISEVWSFK
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.