Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015421_P001 | Maize | nucleus | 82.81 | 80.06 |
| Os02t0266800-01 | Rice | nucleus | 53.12 | 57.05 |
| Os02t0175100-01 | Rice | mitochondrion, nucleus | 48.44 | 55.96 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 54.06 | 55.27 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 53.44 | 54.63 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 52.81 | 53.82 |
| EER90165 | Sorghum | nucleus | 42.81 | 47.74 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 32.81 | 41.83 |
| KRH52637 | Soybean | nucleus | 32.81 | 36.46 |
| KRH16196 | Soybean | cytosol, nucleus | 16.56 | 35.1 |
| KRH61976 | Soybean | nucleus | 31.25 | 33.33 |
| AT5G24800.1 | Thale cress | nucleus | 28.75 | 33.21 |
| CDX88132 | Canola | nucleus | 28.75 | 33.09 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 35.94 | 32.95 |
| CDY05397 | Canola | nucleus | 28.12 | 32.37 |
| CDX80469 | Canola | nucleus | 28.12 | 32.37 |
| Bra009793.1-P | Field mustard | nucleus | 29.38 | 32.3 |
| KRH04810 | Soybean | nucleus | 32.19 | 32.29 |
| CDY05458 | Canola | nucleus | 27.81 | 32.01 |
| Bra020471.1-P | Field mustard | nucleus | 27.81 | 30.8 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 32.5 | 30.14 |
| Solyc08g006110.2.1 | Tomato | nucleus | 32.19 | 29.34 |
| PGSC0003DMT400038493 | Potato | nucleus | 31.88 | 29.23 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 24.06 | 26.83 |
| EES16316 | Sorghum | nucleus | 23.75 | 23.97 |
| EER90738 | Sorghum | nucleus | 25.94 | 20.49 |
| KXG34539 | Sorghum | nucleus | 21.56 | 17.08 |
| EER95953 | Sorghum | nucleus | 20.0 | 14.38 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | UniProt:A0A194YMZ4 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | EnsemblPlants:KXG29589 | ProteinID:KXG29589 | ProteinID:KXG29589.1 | PFAM:PF00170 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF347 | SMART:SM00338 | EnsemblPlantsGene:SORBI_3004G059900 |
| SUPFAM:SSF57959 | UniParc:UPI0001C80CE5 | InterPro:bZIP | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr4:+:4803664..4806909
Molecular Weight (calculated)
34014.6 Da
IEP (calculated)
5.387
GRAVY (calculated)
-0.403
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKCPSELEL EAFLRGREDA TAAAAAAVAE QKPVHDVAAL APFGAGGVFP PSDLSAFSFA DSNTLNGSIH NHLWSHNHNV RHPAVSTTIE SQSSICAAAS
101: PTSATNLYLK ESQTLGGTSG SDSDSESLLD IEGGPCEQST NPQDVKRMRR MVSNRESARR SRKRKQAHLA DLETQVDQLR GENASLFKQL TDANQQFTTA
201: VTDNRILKSD VEALRVKVKL AEDMVARGAL SCGLGSLGLS PVLNPRQACR GPDVLSGLDF PGDDACFTGL SATEQLQNSP LQSIASLESL ENRMASEVTS
301: CGGPGVDVWP WDHSNGGLSK
101: PTSATNLYLK ESQTLGGTSG SDSDSESLLD IEGGPCEQST NPQDVKRMRR MVSNRESARR SRKRKQAHLA DLETQVDQLR GENASLFKQL TDANQQFTTA
201: VTDNRILKSD VEALRVKVKL AEDMVARGAL SCGLGSLGLS PVLNPRQACR GPDVLSGLDF PGDDACFTGL SATEQLQNSP LQSIASLESL ENRMASEVTS
301: CGGPGVDVWP WDHSNGGLSK
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.