Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
15069638
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0266800-01 | Rice | nucleus | 66.06 | 61.41 |
| Zm00001d015421_P001 | Maize | nucleus | 66.06 | 55.29 |
| TraesCS6D01G144400.2 | Wheat | nucleus | 55.96 | 49.52 |
| TraesCS6B01G182500.5 | Wheat | nucleus | 55.6 | 49.2 |
| TraesCS6A01G154600.2 | Wheat | nucleus | 55.23 | 48.73 |
| KXG29589 | Sorghum | nucleus | 55.96 | 48.44 |
| GSMUA_Achr1P23640_001 | Banana | nucleus | 38.27 | 42.23 |
| Os06t0662200-01 | Rice | nucleus | 36.82 | 34.58 |
| KRH04810 | Soybean | nucleus | 36.1 | 31.35 |
| KRH16196 | Soybean | cytosol, nucleus | 16.97 | 31.13 |
| VIT_04s0008g02750.t01 | Wine grape | nucleus | 38.99 | 30.95 |
| CDX88132 | Canola | nucleus | 30.32 | 30.22 |
| Bra009793.1-P | Field mustard | nucleus | 31.05 | 29.55 |
| GSMUA_Achr1P15640_001 | Banana | nucleus | 36.46 | 29.28 |
| CDY05397 | Canola | nucleus | 29.24 | 29.14 |
| CDX80469 | Canola | nucleus | 29.24 | 29.14 |
| PGSC0003DMT400038493 | Potato | nucleus | 36.46 | 28.94 |
| HORVU6Hr1G031330.2 | Barley | nucleus | 29.96 | 28.92 |
| AT5G24800.1 | Thale cress | nucleus | 28.88 | 28.88 |
| CDY05458 | Canola | nucleus | 28.88 | 28.78 |
| KRH61976 | Soybean | nucleus | 31.05 | 28.67 |
| Solyc08g006110.2.1 | Tomato | nucleus | 36.1 | 28.49 |
| KRH52637 | Soybean | nucleus | 29.6 | 28.47 |
| Bra020471.1-P | Field mustard | nucleus | 28.52 | 27.34 |
| Os12t0601800-01 | Rice | nucleus | 23.47 | 24.34 |
| Os03t0796900-01 | Rice | nucleus | 26.35 | 17.18 |
| Os07t0182000-01 | Rice | nucleus | 25.27 | 16.05 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | EMBL:AK069575 | ProteinID:BAD26199.1 | ProteinID:BAD27607.1 |
| ProteinID:BAS77241.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR004827 | EnsemblPlantsGene:Os02g0175100 | EnsemblPlants:Os02t0175100-01 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF347 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI00003B4657 | RefSeq:XP_015623253.1 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
RICE SEED B-ZIPPER 4Similar to RISBZ4. (Os02t0175100-01)
Coordinates
chr2:+:4109810..4112679
Molecular Weight (calculated)
29314.1 Da
IEP (calculated)
4.865
GRAVY (calculated)
-0.479
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIEAFIHGG SGGGDADADH PLGIFSAADL SGFGFADSST ITGGIPNHIW PQSQNLNARH PAVSTTIESQ SSICAASPTS ATNLNMKESQ TLGGTSGSDS
101: ESESLLDIEG GPCEQSTNPL DVKRVRRMVS NRESARRSRK RKQAHLADLE SQVDQLRGEN ASLFKQLTDA NQQFTTSVTD NRILKSDVEA LRVKVKMAED
201: MVARGALSCG LGHLGGLSPA LNPRQACRVP DVLAGLDYAG DDPFTAGLSQ PEQLQMPGGE VVDAWGWDNH PNGGMSK
101: ESESLLDIEG GPCEQSTNPL DVKRVRRMVS NRESARRSRK RKQAHLADLE SQVDQLRGEN ASLFKQLTDA NQQFTTSVTD NRILKSDVEA LRVKVKMAED
201: MVARGALSCG LGHLGGLSPA LNPRQACRVP DVLAGLDYAG DDPFTAGLSQ PEQLQMPGGE VVDAWGWDNH PNGGMSK
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.