Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH16196 | Soybean | cytosol, nucleus | 29.78 | 62.91 |
KRH61976 | Soybean | nucleus | 38.56 | 41.0 |
KRH52637 | Soybean | nucleus | 36.05 | 39.93 |
GSMUA_Achr1P23640_001 | Banana | nucleus | 29.78 | 37.85 |
Os02t0175100-01 | Rice | mitochondrion, nucleus | 31.35 | 36.1 |
Os02t0266800-01 | Rice | nucleus | 31.97 | 34.23 |
Zm00001d015421_P001 | Maize | nucleus | 35.42 | 34.14 |
VIT_04s0008g02750.t01 | Wine grape | nucleus | 36.68 | 33.52 |
TraesCS7B01G391800.1 | Wheat | nucleus | 26.02 | 33.47 |
Solyc08g006110.2.1 | Tomato | nucleus | 36.05 | 32.76 |
TraesCS7A01G488600.2 | Wheat | nucleus | 25.71 | 32.67 |
Zm00001d003529_P001 | Maize | cytosol | 13.17 | 32.56 |
PGSC0003DMT400038493 | Potato | nucleus | 35.42 | 32.38 |
KXG29589 | Sorghum | nucleus | 32.29 | 32.19 |
TraesCS7D01G475100.1 | Wheat | nucleus | 24.45 | 31.58 |
CDY05458 | Canola | nucleus | 26.96 | 30.94 |
CDY05397 | Canola | nucleus | 26.96 | 30.94 |
CDX80469 | Canola | nucleus | 26.96 | 30.94 |
AT5G24800.1 | Thale cress | nucleus | 26.33 | 30.32 |
CDX88132 | Canola | nucleus | 26.33 | 30.22 |
TraesCS6A01G154600.2 | Wheat | nucleus | 29.47 | 29.94 |
Bra009793.1-P | Field mustard | nucleus | 27.27 | 29.9 |
Bra020471.1-P | Field mustard | nucleus | 26.96 | 29.76 |
TraesCS6B01G182500.5 | Wheat | nucleus | 29.15 | 29.71 |
TraesCS6D01G144400.2 | Wheat | nucleus | 28.84 | 29.39 |
Zm00001d050588_P002 | Maize | nucleus | 20.69 | 29.07 |
Zm00001d046937_P001 | Maize | nucleus | 24.45 | 27.66 |
EER90165 | Sorghum | nucleus | 23.82 | 26.48 |
Os06t0662200-01 | Rice | nucleus | 24.14 | 26.1 |
GSMUA_Achr1P15640_001 | Banana | nucleus | 27.9 | 25.8 |
KRG89569 | Soybean | nucleus | 15.67 | 23.26 |
KRG96973 | Soybean | nucleus | 24.76 | 21.41 |
KRH34085 | Soybean | nucleus | 26.65 | 20.38 |
KRG92673 | Soybean | nucleus | 25.71 | 20.35 |
HORVU6Hr1G031330.2 | Barley | nucleus | 16.93 | 18.82 |
KRH68733 | Soybean | nucleus | 23.51 | 18.12 |
Protein Annotations
Gene3D:1.20.5.170 | EntrezGene:100776831 | MapMan:15.5.4.1 | MapMan:15.5.4.2 | EMBL:ACUP02010550 | ncoils:Coil |
EnsemblPlantsGene:GLYMA_17G188500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
InterPro:IPR004827 | UniProt:K7MMI2 | EnsemblPlants:KRH04810 | ProteinID:KRH04810 | ProteinID:KRH04810.1 | PFAM:PF00170 |
ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF113 | SMART:SM00338 | SUPFAM:SSF57959 |
UniParc:UPI000294BAAB | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:-:24484566..24491000
Molecular Weight (calculated)
34632.1 Da
IEP (calculated)
5.206
GRAVY (calculated)
-0.602
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKWGAAAT SIIAANFDDF KWIASMFYPD VANDNVKPCK LDPFTDEAFQ NLEAVTASST CGGVTEDTLV HSQNLTPIQS TISATIDSLS SICVGSPLSA
101: NKPNARDNQV KGATTTTSGS SREPSDEDDE AGPCEQSTNA IDVKRLRRKV SNRESARRSR RRKQAHLADL EWQVERLRLE NANLFKQLTD ASQQFREADT
201: NNRVLKSDVE ALRAKVKLAE DMITRGTLTP TNNQILQNQS PLNTPPQLNT NNLRRMGYVS PTFTVHGNDA TASYGGGITV SGQNSPLGGL GNLDNIPCSD
301: FNSGVNSDNA VSSMTSMWP
101: NKPNARDNQV KGATTTTSGS SREPSDEDDE AGPCEQSTNA IDVKRLRRKV SNRESARRSR RRKQAHLADL EWQVERLRLE NANLFKQLTD ASQQFREADT
201: NNRVLKSDVE ALRAKVKLAE DMITRGTLTP TNNQILQNQS PLNTPPQLNT NNLRRMGYVS PTFTVHGNDA TASYGGGITV SGQNSPLGGL GNLDNIPCSD
301: FNSGVNSDNA VSSMTSMWP
001: MDNHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDSLLW SEGLFPAGPF RDAQSSICEN LSADSPVSAN KPEVRGGVRR TTSGSSHVNS
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
101: DDEDAETEAG QSEMTNDPND LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN RVLKSDVETL RVKVKLAEDL
201: VARGSLTSSL NQLLQTHLSP PSHSISSLHY TGNTSPAITV HSDQSLFPGM TLSGQNSSPG LGNVSSEAVS CVSDIWP
Arabidopsis Description
BZIP9Basic leucine zipper 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FUD3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.