CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG96525
KRH04810
KRH05862
KRH15149
KRH16196
KRH22307
KRH25697
KRH27017
KRH31798
KRH42848
KRH51803
KRH52637
KRH55819
KRH58937
KRH61129
KRH61976
KRH65972
KRH68258
KRH69221
KRH71054
KRH75199

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G34590.1	KRH71054	AT1G13600.1	16709202
AT4G34590.1	KRH75199	AT1G13600.1	16709202
AT4G34590.1	KRH42848	AT2G18160.1	16709202
AT4G34590.1	KRH58937	AT2G18160.1	16709202
AT4G34590.1	KRH22307	AT2G31070.1	21245844
AT4G34590.1	KRH25697	AT2G31070.1	21245844
AT4G34590.1	KRH27017	AT2G31070.1	21245844
AT4G34590.1	KRH55819	AT2G31070.1	21245844
AT4G34590.1	KRG96525	AT3G62420.1	16709202
AT4G34590.1	KRH31798	AT3G62420.1	16709202
AT4G34590.1	KRH65972	AT3G62420.1	16709202
AT4G34590.1	KRH68258	AT3G62420.1	16709202
AT4G34590.1	KRH69221	AT3G62420.1	16709202
AT4G34590.1	KRG96525	AT3G62420.1	16810321
AT4G34590.1	KRH31798	AT3G62420.1	16810321
AT4G34590.1	KRH65972	AT3G62420.1	16810321
AT4G34590.1	KRH68258	AT3G62420.1	16810321
AT4G34590.1	KRH69221	AT3G62420.1	16810321
AT4G34590.1	KRH05862	AT4G34590.1	16709202
AT4G34590.1	KRH15149	AT4G34590.1	16709202
AT4G34590.1	KRH51803	AT4G34590.1	16709202
AT4G34590.1	KRH61129	AT4G34590.1	16709202
AT4G34590.1	KRH04810	AT5G24800.1	16709202
AT4G34590.1	KRH16196	AT5G24800.1	16709202
AT4G34590.1	KRH52637	AT5G24800.1	16709202
AT4G34590.1	KRH61976	AT5G24800.1	16709202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15149	Soybean	nucleus	71.35	82.53
KRH24436	Soybean	nucleus	46.35	55.62
KRH60802	Soybean	nucleus	44.79	55.48
KRH61129	Soybean	nucleus, plastid	43.75	54.9
KRH51803	Soybean	nucleus, plastid	43.75	54.9
CDX75445	Canola	nucleus	43.75	54.55
KRH29414	Soybean	nucleus	46.88	54.22
PGSC0003DMT400009493	Potato	nucleus	41.67	53.33
CDX69072	Canola	nucleus	42.71	53.25
KRH51497	Soybean	nucleus, plastid	38.02	52.9
Bra034639.1-P	Field mustard	nucleus	39.06	52.82
CDX76292	Canola	nucleus	39.06	52.82
CDY17470	Canola	nucleus	39.06	52.82
CDY31528	Canola	nucleus	39.06	52.82
Solyc04g080740.1.1	Tomato	nucleus	40.1	52.38
CDX72490	Canola	nucleus	41.67	52.29
AT4G34590.1	Thale cress	nucleus	43.23	52.2
CDY45319	Canola	nucleus	41.15	51.63
Bra017664.1-P	Field mustard	nucleus	41.15	51.63
Bra011545.1-P	Field mustard	nucleus	44.79	48.04
KRH58937	Soybean	nucleus, plastid	39.58	46.63
KRH42848	Soybean	nucleus	46.35	42.79
EER96530	Sorghum	nucleus	34.38	41.51
Os09t0306400-01	Rice	nucleus	31.77	39.87
TraesCS5A01G179000.1	Wheat	nucleus	31.77	39.61
HORVU5Hr1G054510.1	Barley	nucleus	31.25	38.96
TraesCS5D01G183500.1	Wheat	nucleus	31.25	38.96
KRG96525	Soybean	nucleus	30.21	38.67
TraesCS5B01G176700.1	Wheat	nucleus	30.73	38.56
KRH68258	Soybean	nucleus	29.69	38.0
EES14897	Sorghum	nucleus, plastid	32.29	35.23
Zm00001d005578_P001	Maize	nucleus	30.73	34.71
KRH69221	Soybean	nucleus	26.04	33.56
Zm00001d030577_P001	Maize	nucleus	27.08	32.91
KRH65972	Soybean	nucleus	20.31	31.97
KRH31798	Soybean	nucleus	24.48	30.92
KRH11069	Soybean	cytosol, plastid	30.73	24.08
Os08t0357300-01	Rice	cytosol	13.02	22.12
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	11.46	18.18

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A0R0FII4	EMBL:ACUP02010782	EnsemblPlantsGene:GLYMA_17G253200	GO:GO:0003674
GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR004827	EnsemblPlants:KRH05862	ProteinID:KRH05862	ProteinID:KRH05862.1	PFAM:PF00170
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF229	SMART:SM00338	SUPFAM:SSF57959
UniParc:UPI0006EDC685	InterPro:bZIP	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:40739708..40740520

Molecular Weight (calculated)

22143.6 Da

IEP (calculated)

10.275

GRAVY (calculated)

-0.604

Length

192 amino acids

Sequence
(BLAST)

001: MSPVLSEILR SGFMINSSLR RRTHLVQSFS VVFLYCGTSS TSILLQSSGS EEDLQLLMEQ RKKKRKQSNR ESARRSRMRK QKHLDDLIAQ VDLLKKQKSL
101: TLKKVNITTQ HCLKVEAENS ILGAQKTELT QSLQSLNDII NLINTTTTSD HNNYYYNNNN NNNNNNFMMN PMHMAYLNQP IVATADNNMF LW

Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)

001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC

Arabidopsis Description

BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.