CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51497	Soybean	nucleus, plastid	72.26	81.16
KRH24436	Soybean	nucleus	75.48	73.12
KRH29414	Soybean	nucleus	76.77	71.69
Solyc01g109880.2.1	Tomato	nucleus	69.03	65.64
PGSC0003DMT400079474	Potato	nucleus	68.39	63.86
VIT_18s0001g13040.t01	Wine grape	nucleus	60.65	61.04
PGSC0003DMT400043542	Potato	nucleus	58.06	56.6
Solyc10g054010.1.1	Tomato	nucleus	56.77	53.99
KRH58937	Soybean	nucleus, plastid	53.55	50.92
KRH15149	Soybean	nucleus	53.55	50.0
KRH51803	Soybean	nucleus, plastid	47.1	47.71
KRH61129	Soybean	nucleus, plastid	47.1	47.71
KRH05862	Soybean	nucleus	55.48	44.79
Os09t0306400-01	Rice	nucleus	42.58	43.14
EER96530	Sorghum	nucleus	43.23	42.14
HORVU5Hr1G054510.1	Barley	nucleus	41.29	41.56
TraesCS5D01G183500.1	Wheat	nucleus	40.65	40.91
TraesCS5B01G176700.1	Wheat	nucleus	40.0	40.52
TraesCS5A01G179000.1	Wheat	nucleus	40.0	40.26
KRG96525	Soybean	nucleus	38.71	40.0
KRH68258	Soybean	nucleus	38.06	39.33
KRH42848	Soybean	nucleus	52.26	38.94
KRH69221	Soybean	nucleus	37.42	38.93
EES14897	Sorghum	nucleus, plastid	43.87	38.64
KRH31798	Soybean	nucleus	37.42	38.16
Zm00001d005578_P001	Maize	nucleus	40.65	37.06
Zm00001d030577_P001	Maize	nucleus	37.42	36.71
KRH65972	Soybean	nucleus	26.45	33.61
KRH11069	Soybean	cytosol, plastid	50.32	31.84
Os08t0357300-01	Rice	cytosol	20.65	28.32
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	16.77	21.49

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:778171	EMBL:ACUP02002140	EMBL:BT089153	ncoils:Coil
EMBL:DQ787057	EnsemblPlantsGene:GLYMA_04G010300	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlants:KRH60802
ProteinID:KRH60802	ProteinID:KRH60802.1	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF229	UniProt:Q0GPF7	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0000DDB49A	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:815525..817018

Molecular Weight (calculated)

17432.5 Da

IEP (calculated)

6.959

GRAVY (calculated)

-0.644

Length

155 amino acids

Sequence
(BLAST)

001: MACSSGTSSG ATSSMLQNNS GSEEELQALM EQRKRKRMIS NRESARRSRM RKQKHLDDLA SQVTQLRNEN HQILTSVNLT TQKYLAVEAE NSVLRAQVNE
101: LSHWLESLNE IIHFLNATDG GPPPPPSSFF EPDATFFNKA YLSQPIMASA DMLQY

Best Arabidopsis Sequence Match ( AT4G34590.1 )
(BLAST)

001: MESSSSGTTS STIQTSSGSE ESLMEQRKRK RMLSNRESAR RSRMKKQKLL DDLTAQVNHL KKENTEIVTS VSITTQHYLT VEAENSVLRA QLDELNHRLQ
101: SLNDIIEFLD SSNNNNNNNM GMCSNPLVGL ECDDFFVNQM NMSYIMNQPL MASSDALMY

Arabidopsis Description

BZIP11bZIP transcription factor 11 [Source:UniProtKB/Swiss-Prot;Acc:O65683]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.