Skip to main content
crop-pal logo
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g109880.2.1 Tomato nucleus 94.58 96.32
KRH60802 Soybean nucleus 63.86 68.39
KRH24436 Soybean nucleus 65.06 67.5
PGSC0003DMT400043542 Potato nucleus 64.46 67.3
VIT_03s0038g04450.t01 Wine grape nucleus 63.25 66.88
KRH29414 Soybean nucleus 65.06 65.06
KRH51497 Soybean nucleus, plastid 53.61 64.49
PGSC0003DMT400009068 Potato nucleus 53.01 61.11
PGSC0003DMT400009493 Potato nucleus 54.22 60.0
PGSC0003DMT400040054 Potato nucleus 42.17 53.03
PGSC0003DMT400058187 Potato nucleus 52.41 52.41
PGSC0003DMT400007165 Potato nucleus 34.34 41.3
PGSC0003DMT400085559 Potato nucleus 34.34 41.3
Os09t0306400-01 Rice nucleus 37.95 41.18
PGSC0003DMT400088166 Potato nucleus 35.54 40.97
EER96530 Sorghum nucleus 39.16 40.88
PGSC0003DMT400018832 Potato nucleus 34.94 40.28
HORVU5Hr1G054510.1 Barley nucleus 35.54 38.31
TraesCS5A01G179000.1 Wheat nucleus 34.94 37.66
EES14897 Sorghum nucleus, plastid 39.76 37.5
TraesCS5B01G176700.1 Wheat nucleus 34.34 37.25
TraesCS5D01G183500.1 Wheat nucleus 34.34 37.01
Zm00001d030577_P001 Maize nucleus 33.73 35.44
Zm00001d005578_P001 Maize nucleus 36.14 35.29
KRH11069 Soybean cytosol, plastid 43.98 29.8
Os08t0357300-01 Rice cytosol 18.07 26.55
Zm00001d020025_P001 Maize endoplasmic reticulum, extracellular 13.86 19.01
Protein Annotations
Gene3D:1.20.5.170EntrezGene:102591302MapMan:15.5.4.1ncoils:CoilGO:GO:0003674GO:GO:0003700
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
InterPro:IPR004827UniProt:M1D1W3PFAM:PF00170EnsemblPlantsGene:PGSC0003DMG400030946PGSC:PGSC0003DMG400030946EnsemblPlants:PGSC0003DMT400079474
ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF229SMART:SM00338SUPFAM:SSF57959
UniParc:UPI000294CA83RefSeq:XP_006362037.1InterPro:bZIPSEG:seg::
Description
BZIP transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400030946]
Coordinates
chr1:+:86264083..86265430
Molecular Weight (calculated)
18981.3 Da
IEP (calculated)
6.797
GRAVY (calculated)
-0.725
Length
166 amino acids
Sequence
(BLAST)
001: MASSSGTSSG SSFLQNSGSE EDLQQLMDQR KRKRMISNRE SARRSRMRKQ KHLDDLMGQV TNLRKENNQI LTSMNVTTQH YLNVEAENSI LRAQLSELSR
101: RLESLNEIIT VLDANNNCNG LVMDHNEPYS FNFAQNDIML DGFNVTNSWN YLSANQPIMT ANVLQY
Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.