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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400079474 Potato nucleus 96.32 94.58
KRH60802 Soybean nucleus 65.64 69.03
KRH24436 Soybean nucleus 66.87 68.12
VIT_03s0038g04450.t01 Wine grape nucleus 63.8 66.24
KRH51497 Soybean nucleus, plastid 55.83 65.94
KRH29414 Soybean nucleus 66.87 65.66
Solyc03g033730.1.1 Tomato nucleus 45.4 64.35
Solyc10g054010.1.1 Tomato nucleus 63.8 63.8
Solyc02g084860.1.1 Tomato nucleus 53.99 61.11
Solyc04g080740.1.1 Tomato nucleus 51.53 57.14
Solyc01g079480.2.1 Tomato nucleus 38.04 43.06
Os09t0306400-01 Rice nucleus 39.88 42.48
EER96530 Sorghum nucleus 41.1 42.14
Solyc01g100460.2.1 Tomato nucleus 34.97 41.3
Solyc06g009640.1.1 Tomato nucleus 36.2 40.97
HORVU5Hr1G054510.1 Barley nucleus 37.42 39.61
TraesCS5B01G176700.1 Wheat nucleus 36.2 38.56
TraesCS5D01G183500.1 Wheat nucleus 36.2 38.31
TraesCS5A01G179000.1 Wheat nucleus 36.2 38.31
EES14897 Sorghum nucleus, plastid 41.1 38.07
Zm00001d030577_P001 Maize nucleus 35.58 36.71
Zm00001d005578_P001 Maize nucleus 38.04 36.47
KRH11069 Soybean cytosol, plastid 45.4 30.2
Os08t0357300-01 Rice cytosol 19.02 27.43
Zm00001d020025_P001 Maize endoplasmic reticulum, extracellular 14.72 19.83
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1UniProt:C0KYN1ncoils:CoilEMBL:FJ647190GO:GO:0003674
GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987InterPro:IPR004827PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952
PANTHER:PTHR22952:SF229SMART:SM00338SUPFAM:SSF57959EnsemblPlantsGene:Solyc01g109880.2EnsemblPlants:Solyc01g109880.2.1UniParc:UPI000195F754
InterPro:bZIPSEG:seg::::
Description
BZIP transcription factor [Source:UniProtKB/TrEMBL;Acc:C0KYN1]
Coordinates
chr1:+:96724007..96725081
Molecular Weight (calculated)
18657.9 Da
IEP (calculated)
6.265
GRAVY (calculated)
-0.683
Length
163 amino acids
Sequence
(BLAST)
001: MASSSGTSSG SSFIQNSGSE EDLQQLMDQR KRKRMISNRE SARRSRMRKQ KHLDDLMSQV TNLRKENNQI LTSMNVTTQH YLNVEAENSI LRAQLSELSR
101: RLESLNEIIA VLDANSGLVM DHNEPYSFNF AQNDIMFDGF NVTNSWNYLS ANQPIMTADV LQY
Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.