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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085559 Potato nucleus 97.1 97.1
PGSC0003DMT400007165 Potato nucleus 97.1 97.1
VIT_14s0060g01210.t01 Wine grape nucleus 55.8 53.1
Solyc06g009640.1.1 Tomato nucleus 51.45 49.31
Solyc01g079480.2.1 Tomato nucleus 48.55 46.53
GSMUA_Achr11P... Banana nucleus 46.38 44.44
GSMUA_Achr8P22330_001 Banana nucleus 44.93 43.06
Solyc02g084860.1.1 Tomato nucleus 44.2 42.36
Solyc04g080740.1.1 Tomato nucleus 44.2 41.5
Solyc03g033730.1.1 Tomato nucleus 34.06 40.87
GSMUA_Achr8P29960_001 Banana nucleus 42.03 40.28
GSMUA_Achr11P... Banana nucleus 39.86 39.57
Solyc01g109880.2.1 Tomato nucleus 41.3 34.97
Os09t0306400-01 Rice nucleus 36.23 32.68
Solyc10g054010.1.1 Tomato nucleus 37.68 31.9
EER96530 Sorghum nucleus 36.23 31.45
TraesCS5B01G176700.1 Wheat nucleus 34.78 31.37
TraesCS5D01G183500.1 Wheat nucleus 34.78 31.17
TraesCS5A01G179000.1 Wheat nucleus 34.06 30.52
HORVU5Hr1G054510.1 Barley nucleus 34.06 30.52
Zm00001d005578_P001 Maize nucleus 36.23 29.41
Zm00001d030577_P001 Maize nucleus 30.43 26.58
EES14897 Sorghum nucleus, plastid 33.33 26.14
Os08t0357300-01 Rice cytosol 18.84 23.01
Zm00001d020025_P001 Maize endoplasmic reticulum, extracellular 15.94 18.18
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1EMBL:AJ715788GO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF167UniProt:Q6A1K9
SMART:SM00338SUPFAM:SSF57959EnsemblPlantsGene:Solyc01g100460.2EnsemblPlants:Solyc01g100460.2.1UniParc:UPI00003FF7C2InterPro:bZIP
SEG:seg:::::
Description
Anaerobic basic leucine zipper protein [Source:UniProtKB/TrEMBL;Acc:Q6A1K9]
Coordinates
chr1:+:90482849..90484121
Molecular Weight (calculated)
15421.5 Da
IEP (calculated)
10.074
GRAVY (calculated)
-0.662
Length
138 amino acids
Sequence
(BLAST)
001: MSPLRQSASS SASDDDQRYA GMDEKKRKRM ISNRESARRS RMKKQKLLQD LTGEVSRLQG ANKNIVSKID ETTERYAICA AQNNVLRAQA MELTDRLRYL
101: NDVIDSTGLA ADVADPLLKP LQNPCAMQPI ASSGLFKF
Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.