Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400085559 | Potato | nucleus | 53.79 | 56.52 |
| PGSC0003DMT400007165 | Potato | nucleus | 53.79 | 56.52 |
| Solyc01g100460.2.1 | Tomato | nucleus | 53.1 | 55.8 |
| GSMUA_Achr8P22330_001 | Banana | nucleus | 51.72 | 52.08 |
| GSMUA_Achr11P... | Banana | nucleus | 51.03 | 51.39 |
| VIT_07s0005g01450.t01 | Wine grape | nucleus | 48.97 | 48.97 |
| GSMUA_Achr11P... | Banana | nucleus | 45.52 | 47.48 |
| GSMUA_Achr8P29960_001 | Banana | nucleus | 44.14 | 44.44 |
| VIT_03s0038g04450.t01 | Wine grape | nucleus | 45.52 | 42.04 |
| VIT_18s0001g13040.t01 | Wine grape | nucleus | 44.14 | 41.56 |
| VIT_05s0077g01140.t01 | Wine grape | nucleus | 40.69 | 38.31 |
| VIT_04s0023g02430.t01 | Wine grape | nucleus | 40.69 | 37.58 |
| Os09t0306400-01 | Rice | nucleus | 36.55 | 34.64 |
| EER96530 | Sorghum | nucleus | 35.86 | 32.7 |
| TraesCS5B01G176700.1 | Wheat | nucleus | 33.79 | 32.03 |
| TraesCS5D01G183500.1 | Wheat | nucleus | 33.79 | 31.82 |
| HORVU5Hr1G054510.1 | Barley | nucleus | 33.1 | 31.17 |
| TraesCS5A01G179000.1 | Wheat | nucleus | 32.41 | 30.52 |
| Zm00001d005578_P001 | Maize | nucleus | 34.48 | 29.41 |
| EES14897 | Sorghum | nucleus, plastid | 33.1 | 27.27 |
| Zm00001d030577_P001 | Maize | nucleus | 29.66 | 27.22 |
| Os08t0357300-01 | Rice | cytosol | 17.24 | 22.12 |
| Zm00001d020025_P001 | Maize | endoplasmic reticulum, extracellular | 17.24 | 20.66 |
Protein Annotations
| Gene3D:1.20.5.170 | EntrezGene:100244279 | wikigene:100244279 | MapMan:15.5.4.1 | ProteinID:CBI39593 | ProteinID:CBI39593.3 |
| ncoils:Coil | UniProt:D7UA29 | EMBL:FN596746 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| EntrezGene:LOC100244279 | wikigene:LOC100244279 | PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
| PANTHER:PTHR22952:SF167 | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:TC64856 | UniParc:UPI00015CA0F4 | ArrayExpress:VIT_14s0060g01210 |
| EnsemblPlantsGene:VIT_14s0060g01210 | EnsemblPlants:VIT_14s0060g01210.t01 | unigene:Vvi.16551 | RefSeq:XP_002282195 | RefSeq:XP_002282195.1 | InterPro:bZIP |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:959578..961198
Molecular Weight (calculated)
16636.1 Da
IEP (calculated)
6.764
GRAVY (calculated)
-0.602
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGPRQTISS ASEEDPQYAM MDEKKRRRML SNRESARRSR MKKQKLSEDL ISEVSRLQNL NKEIKQTIDA TTQGYQNFVS ENNVLVAQKM ELVDRLNSLN
101: FILQNVQDVY GVPLDIPEIP DPLLKPWSLP CPLQLIPASS DMLQF
101: FILQNVQDVY GVPLDIPEIP DPLLKPWSLP CPLQLIPASS DMLQF
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.