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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr8P22330_001 Banana nucleus 42.21 45.14
GSMUA_Achr11P... Banana nucleus 41.56 44.44
VIT_14s0060g01210.t01 Wine grape nucleus 38.31 40.69
VIT_07s0005g01450.t01 Wine grape nucleus 37.66 40.0
GSMUA_Achr8P29960_001 Banana nucleus 34.42 36.81
GSMUA_Achr11P... Banana nucleus 33.12 36.69
VIT_03s0038g04450.t01 Wine grape nucleus 35.06 34.39
VIT_18s0001g13040.t01 Wine grape nucleus 31.82 31.82
VIT_04s0023g02430.t01 Wine grape nucleus 31.82 31.21
HORVU5Hr1G054510.1 Barley nucleus 29.22 29.22
Os09t0306400-01 Rice nucleus 28.57 28.76
TraesCS5D01G183500.1 Wheat nucleus 28.57 28.57
TraesCS5A01G179000.1 Wheat nucleus 28.57 28.57
TraesCS5B01G176700.1 Wheat nucleus 27.92 28.1
EER96530 Sorghum nucleus 28.57 27.67
Zm00001d005578_P001 Maize nucleus 26.62 24.12
EES14897 Sorghum nucleus, plastid 25.97 22.73
Zm00001d030577_P001 Maize nucleus 21.43 20.89
Os08t0357300-01 Rice cytosol 9.74 13.27
Zm00001d020025_P001 Maize endoplasmic reticulum, extracellular 9.09 11.57
Protein Annotations
Gene3D:1.20.5.170EntrezGene:100260200wikigene:100260200MapMan:15.5.4.1ProteinID:CCB47979ProteinID:CCB47979.1
ncoils:CoilUniProt:F6H732EMBL:FN595246GO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
EntrezGene:LOC100260200wikigene:LOC100260200PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952
PANTHER:PTHR22952:SF351SMART:SM00338SUPFAM:SSF57959TIGR:TC60868UniParc:UPI0001983297ArrayExpress:VIT_05s0077g01140
EnsemblPlantsGene:VIT_05s0077g01140EnsemblPlants:VIT_05s0077g01140.t01unigene:Vvi.8793RefSeq:XP_003631940RefSeq:XP_003631940.1RefSeq:XP_010649526.1
InterPro:bZIPSEG:seg::::
Description
No Description!
Coordinates
chr5:-:878161..879142
Molecular Weight (calculated)
17646.3 Da
IEP (calculated)
10.436
GRAVY (calculated)
-0.741
Length
154 amino acids
Sequence
(BLAST)
001: MSSAQYGSAG LKENSPCGAV DEKKRKRMIS NRESARRSRM RKQQHLDDLI KRKSELENQR LEIKRRIDMF QKLWEATVGE NNALEALKAE LTKELESAKS
101: CVSDFKAIDR LETNFAGNRM LKPLMDVSGA REIVLQPWQL GRSSQPIAAT MFQF
Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.