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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400007165 Potato nucleus 100.0 100.0
Solyc01g100460.2.1 Tomato nucleus 97.1 97.1
VIT_14s0060g01210.t01 Wine grape nucleus 56.52 53.79
PGSC0003DMT400018832 Potato nucleus 52.17 50.0
PGSC0003DMT400088166 Potato nucleus 48.55 46.53
GSMUA_Achr8P22330_001 Banana nucleus 45.65 43.75
GSMUA_Achr11P... Banana nucleus 44.93 43.06
PGSC0003DMT400009068 Potato nucleus 43.48 41.67
GSMUA_Achr8P29960_001 Banana nucleus 41.3 39.58
PGSC0003DMT400009493 Potato nucleus 42.75 39.33
GSMUA_Achr11P... Banana nucleus 39.13 38.85
PGSC0003DMT400040054 Potato nucleus 33.33 34.85
PGSC0003DMT400079474 Potato nucleus 41.3 34.34
PGSC0003DMT400043542 Potato nucleus 39.13 33.96
PGSC0003DMT400058187 Potato nucleus 39.86 33.13
Os09t0306400-01 Rice nucleus 35.51 32.03
EER96530 Sorghum nucleus 35.51 30.82
TraesCS5B01G176700.1 Wheat nucleus 34.06 30.72
TraesCS5D01G183500.1 Wheat nucleus 34.06 30.52
HORVU5Hr1G054510.1 Barley nucleus 33.33 29.87
TraesCS5A01G179000.1 Wheat nucleus 33.33 29.87
Zm00001d005578_P001 Maize nucleus 35.51 28.82
Zm00001d030577_P001 Maize nucleus 29.71 25.95
EES14897 Sorghum nucleus, plastid 32.61 25.57
Os08t0357300-01 Rice cytosol 18.84 23.01
Zm00001d020025_P001 Maize endoplasmic reticulum, extracellular 15.94 18.18
Protein Annotations
Gene3D:1.20.5.170EntrezGene:102606174MapMan:15.5.4.1ProteinID:AFX66992ProteinID:AFX66992.1GO:GO:0003674
GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987InterPro:IPR004827EMBL:JX683428UniProt:M1D9R8PFAM:PF00170EnsemblPlantsGene:PGSC0003DMG400035130
PGSC:PGSC0003DMG400035130EnsemblPlants:PGSC0003DMT400085559ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF167
SMART:SM00338SUPFAM:SSF57959UniParc:UPI0002955253RefSeq:XP_006344760.1InterPro:bZIPSEG:seg
Description
Anaerobic basic leucine zipper protein [Source:PGSC_GENE;Acc:PGSC0003DMG400035130]
Coordinates
chr1:+:78141668..78142084
Molecular Weight (calculated)
15405.5 Da
IEP (calculated)
10.255
GRAVY (calculated)
-0.664
Length
138 amino acids
Sequence
(BLAST)
001: MSPLRQSASS SASDDDQRYA GMDEKKRKRM ISNRESARRS RMKKQKLVQD LTGEVSRLQS ANKNIVSKID ETTERYAICA AQNNVLRAQA MELTDRLRYL
101: NDVIDSTGLA AGVADPLLKP LQNPCPMQPI ASSGLFKF
Best Arabidopsis Sequence Match ( AT3G62420.1 )
(BLAST)
001: MGSLQMQTSP ESDNDPRYAT VTDERKRKRM ISNRESARRS RMRKQKQLGD LINEVTLLKN DNAKITEQVD EASKKYIEME SKNNVLRAQA SELTDRLRSL
101: NSVLEMVEEI SGQALDIPEI PESMQNPWQM PCPMQPIRAS ADMFDC
Arabidopsis Description
BZIP53bZIP transcription factor 53 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZP8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.