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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400043542 Potato nucleus 90.18 92.45
Solyc01g109880.2.1 Tomato nucleus 63.8 63.8
VIT_03s0038g04450.t01 Wine grape nucleus 58.9 61.15
KRH24436 Soybean nucleus 58.9 60.0
Solyc03g033730.1.1 Tomato nucleus 41.1 58.26
KRH60802 Soybean nucleus 53.99 56.77
KRH29414 Soybean nucleus 57.67 56.63
KRH51497 Soybean nucleus, plastid 47.85 56.52
Solyc04g080740.1.1 Tomato nucleus 49.69 55.1
Solyc02g084860.1.1 Tomato nucleus 46.01 52.08
Os09t0306400-01 Rice nucleus 37.42 39.87
EER96530 Sorghum nucleus 38.65 39.62
Solyc01g079480.2.1 Tomato nucleus 34.97 39.58
Solyc06g009640.1.1 Tomato nucleus 33.74 38.19
Solyc01g100460.2.1 Tomato nucleus 31.9 37.68
HORVU5Hr1G054510.1 Barley nucleus 34.36 36.36
TraesCS5B01G176700.1 Wheat nucleus 33.74 35.95
TraesCS5D01G183500.1 Wheat nucleus 33.74 35.71
TraesCS5A01G179000.1 Wheat nucleus 33.74 35.71
EES14897 Sorghum nucleus, plastid 35.58 32.95
Zm00001d005578_P001 Maize nucleus 34.36 32.94
Zm00001d030577_P001 Maize nucleus 31.29 32.28
KRH11069 Soybean cytosol, plastid 39.88 26.53
Os08t0357300-01 Rice cytosol 15.95 23.01
Zm00001d020025_P001 Maize endoplasmic reticulum, extracellular 14.11 19.01
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
UniProt:K4D0Z9PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF229
SMART:SM00338SUPFAM:SSF57959EnsemblPlantsGene:Solyc10g054010.1EnsemblPlants:Solyc10g054010.1.1UniParc:UPI000276A88FInterPro:bZIP
SEG:seg:::::
Description
No Description!
Coordinates
chr10:+:54449460..54449951
Molecular Weight (calculated)
18704.0 Da
IEP (calculated)
4.997
GRAVY (calculated)
-0.687
Length
163 amino acids
Sequence
(BLAST)
001: MASSSGTSSG SGSGSGSYTL LNSGSEEDLQ QLMDERKRKR MISNRESAWR SRMRKQKHLD DLMSQLSNLM KENNEILTNM SVTTQNYLNI EAENSILRAQ
101: VSELKQRFES LTKITSVLSY NGNINEISND QIFHESYLVD ALIQNEFWND MYHPIMTADI MQY
Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
Arabidopsis Description
BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.