CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29414	Soybean	nucleus	96.25	92.77
KRH60802	Soybean	nucleus	73.12	75.48
KRH51497	Soybean	nucleus, plastid	63.12	73.19
VIT_18s0001g13040.t01	Wine grape	nucleus	64.38	66.88
Solyc01g109880.2.1	Tomato	nucleus	68.12	66.87
PGSC0003DMT400079474	Potato	nucleus	67.5	65.06
PGSC0003DMT400043542	Potato	nucleus	60.62	61.01
Solyc10g054010.1.1	Tomato	nucleus	60.0	58.9
KRH58937	Soybean	nucleus, plastid	55.62	54.6
KRH61129	Soybean	nucleus, plastid	51.25	53.59
KRH15149	Soybean	nucleus	55.0	53.01
KRH51803	Soybean	nucleus, plastid	50.62	52.94
KRH05862	Soybean	nucleus	55.62	46.35
EER96530	Sorghum	nucleus	43.12	43.4
Os09t0306400-01	Rice	nucleus	41.25	43.14
KRH11069	Soybean	cytosol, plastid	65.0	42.45
KRH42848	Soybean	nucleus	55.0	42.31
KRG96525	Soybean	nucleus	38.75	41.33
KRH31798	Soybean	nucleus	38.75	40.79
KRH68258	Soybean	nucleus	38.12	40.67
KRH69221	Soybean	nucleus	37.5	40.27
TraesCS5D01G183500.1	Wheat	nucleus	38.75	40.26
HORVU5Hr1G054510.1	Barley	nucleus	38.75	40.26
TraesCS5B01G176700.1	Wheat	nucleus	37.5	39.22
EES14897	Sorghum	nucleus, plastid	43.12	39.2
TraesCS5A01G179000.1	Wheat	nucleus	37.5	38.96
Zm00001d030577_P001	Maize	nucleus	37.5	37.97
KRH65972	Soybean	nucleus	28.12	36.89
Zm00001d005578_P001	Maize	nucleus	38.75	36.47
Os08t0357300-01	Rice	cytosol	20.62	29.2
Zm00001d020025_P001	Maize	endoplasmic reticulum, extracellular	16.88	22.31

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100101862	MapMan:15.5.4.1	EMBL:ACUP02007175	EMBL:BT096484	ncoils:Coil
EMBL:DQ787056	EnsemblPlantsGene:GLYMA_12G040600	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	EnsemblPlants:KRH24436
ProteinID:KRH24436	ProteinID:KRH24436.1	EMBL:KT031140	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF229	UniProt:Q0GPF8	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0000DDB499
InterPro:bZIP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:2932161..2934050

Molecular Weight (calculated)

17689.8 Da

IEP (calculated)

7.783

GRAVY (calculated)

-0.452

Length

160 amino acids

Sequence
(BLAST)

001: MASSSGTSSG SSLLQNSGSE EDLQAVMDQR KRKRMISNRE SARRSRMRKQ KHLDDLVSQV AQLRKENQQI LTSVNITTQQ YLSVEAENSV LRAQVGELSH
101: RLESLNEIVD VLNATTVAGF GAAATSSTFV EPINNNSFFN PLNMGYLNHP IMASADILQY

Best Arabidopsis Sequence Match ( AT1G75390.1 )
(BLAST)

001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC

Arabidopsis Description

BZIP44bZIP transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:C0Z2L5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.